Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC084036.1-201ENST00000609190 508 ntBASIC5.05□□□□□ -1.6
SHANK2Q9UPX8 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHANK2Q9UPX8 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
SHANK2Q9UPX8 MTND4P26-201ENST00000415971 1359 ntBASIC5.04□□□□□ -1.6
SHANK2Q9UPX8 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHANK2Q9UPX8 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
SHANK2Q9UPX8 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHANK2Q9UPX8 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SHANK2Q9UPX8 RPL32P28-201ENST00000443577 397 ntBASIC5.04□□□□□ -1.6
SHANK2Q9UPX8 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.04□□□□□ -1.6
SHANK2Q9UPX8 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC5.04□□□□□ -1.6
SHANK2Q9UPX8 AC004924.1-201ENST00000480160 781 ntBASIC5.04□□□□□ -1.6
SHANK2Q9UPX8 RPL23AP73-201ENST00000492507 471 ntBASIC5.04□□□□□ -1.6
SHANK2Q9UPX8 AC138409.2-202ENST00000507274 458 ntBASIC5.04□□□□□ -1.6
SHANK2Q9UPX8 OR10D4P-201ENST00000525892 951 ntBASIC5.04□□□□□ -1.6
SHANK2Q9UPX8 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.04□□□□□ -1.6
SHANK2Q9UPX8 AC093732.2-201ENST00000607950 274 ntBASIC5.04□□□□□ -1.6
SHANK2Q9UPX8 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHANK2Q9UPX8 AC000123.3-201ENST00000624029 4975 ntBASIC5.04□□□□□ -1.6
SHANK2Q9UPX8 HSPA8P19-201ENST00000505359 1517 ntBASIC5.04□□□□□ -1.6
SHANK2Q9UPX8 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
SHANK2Q9UPX8 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.04□□□□□ -1.6
SHANK2Q9UPX8 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SHANK2Q9UPX8 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SHANK2Q9UPX8 BCLAF1P1-201ENST00000505813 2752 ntBASIC5.03□□□□□ -1.6
SHANK2Q9UPX8 RNU1-140P-201ENST00000365040 165 ntBASIC5.03□□□□□ -1.6
SHANK2Q9UPX8 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.03□□□□□ -1.6
SHANK2Q9UPX8 RPL23AP82-202ENST00000427528 469 ntBASIC5.03□□□□□ -1.6
SHANK2Q9UPX8 CENPBD1P1-201ENST00000464061 469 ntBASIC5.03□□□□□ -1.6
SHANK2Q9UPX8 RPL23AP71-201ENST00000470966 469 ntBASIC5.03□□□□□ -1.6
SHANK2Q9UPX8 RPS3AP50-201ENST00000487064 803 ntBASIC5.03□□□□□ -1.6
SHANK2Q9UPX8 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.03□□□□□ -1.6
SHANK2Q9UPX8 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.03□□□□□ -1.6
SHANK2Q9UPX8 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC5.03□□□□□ -1.6
SHANK2Q9UPX8 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.03□□□□□ -1.6
SHANK2Q9UPX8 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SHANK2Q9UPX8 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.03□□□□□ -1.6
SHANK2Q9UPX8 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHANK2Q9UPX8 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHANK2Q9UPX8 AL136131.1-201ENST00000406079 803 ntBASIC5.02□□□□□ -1.61
SHANK2Q9UPX8 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.02□□□□□ -1.61
SHANK2Q9UPX8 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.02□□□□□ -1.61
SHANK2Q9UPX8 AC093698.1-201ENST00000423843 571 ntBASIC5.02□□□□□ -1.61
SHANK2Q9UPX8 SKP1P1-201ENST00000438081 489 ntBASIC5.02□□□□□ -1.61
SHANK2Q9UPX8 SYT14P1-201ENST00000481459 721 ntBASIC5.02□□□□□ -1.61
SHANK2Q9UPX8 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC5.02□□□□□ -1.61
SHANK2Q9UPX8 AC135001.1-201ENST00000544546 283 ntBASIC5.02□□□□□ -1.61
SHANK2Q9UPX8 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SHANK2Q9UPX8 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SHANK2Q9UPX8 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.02□□□□□ -1.61
SHANK2Q9UPX8 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHANK2Q9UPX8 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHANK2Q9UPX8 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHANK2Q9UPX8 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.02□□□□□ -1.61
SHANK2Q9UPX8 FAM35BP-202ENST00000497389 3337 ntBASIC5.02□□□□□ -1.61
SHANK2Q9UPX8 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SHANK2Q9UPX8 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
SHANK2Q9UPX8 NACAP7-201ENST00000407371 609 ntBASIC5.01□□□□□ -1.61
SHANK2Q9UPX8 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC5.01□□□□□ -1.61
SHANK2Q9UPX8 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.01□□□□□ -1.61
SHANK2Q9UPX8 AC002075.2-201ENST00000425207 252 ntBASIC5.01□□□□□ -1.61
SHANK2Q9UPX8 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC5.01□□□□□ -1.61
SHANK2Q9UPX8 DNAJC19P1-201ENST00000455312 319 ntBASIC5.01□□□□□ -1.61
SHANK2Q9UPX8 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC5.01□□□□□ -1.61
SHANK2Q9UPX8 AC099560.2-201ENST00000457554 255 ntBASIC5.01□□□□□ -1.61
SHANK2Q9UPX8 APOOP4-201ENST00000513530 597 ntBASIC5.01□□□□□ -1.61
SHANK2Q9UPX8 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.01□□□□□ -1.61
SHANK2Q9UPX8 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.01□□□□□ -1.61
SHANK2Q9UPX8 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.01□□□□□ -1.61
SHANK2Q9UPX8 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC5.01□□□□□ -1.61
SHANK2Q9UPX8 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC5.01□□□□□ -1.61
SHANK2Q9UPX8 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC5.01□□□□□ -1.61
SHANK2Q9UPX8 AC068722.2-201ENST00000618734 544 ntBASIC5.01□□□□□ -1.61
SHANK2Q9UPX8 DLD-214ENST00000639772 421 ntTSL 5 BASIC5.01□□□□□ -1.61
SHANK2Q9UPX8 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SHANK2Q9UPX8 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SHANK2Q9UPX8 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.01□□□□□ -1.61
SHANK2Q9UPX8 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHANK2Q9UPX8 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.01□□□□□ -1.61
SHANK2Q9UPX8 CR381670.1-201ENST00000624291 1693 ntBASIC5.01□□□□□ -1.61
SHANK2Q9UPX8 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SHANK2Q9UPX8 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5□□□□□ -1.61
SHANK2Q9UPX8 Y_RNA.638-201ENST00000459374 113 ntBASIC5□□□□□ -1.61
SHANK2Q9UPX8 RPS3AP43-201ENST00000479743 781 ntBASIC5□□□□□ -1.61
SHANK2Q9UPX8 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC5□□□□□ -1.61
SHANK2Q9UPX8 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC5□□□□□ -1.61
SHANK2Q9UPX8 AL121603.1-201ENST00000553815 142 ntBASIC5□□□□□ -1.61
SHANK2Q9UPX8 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5□□□□□ -1.61
SHANK2Q9UPX8 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5□□□□□ -1.61
SHANK2Q9UPX8 AL049844.2-201ENST00000604280 628 ntBASIC5□□□□□ -1.61
SHANK2Q9UPX8 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC5□□□□□ -1.61
SHANK2Q9UPX8 RNVU1-4-201ENST00000612985 164 ntBASIC5□□□□□ -1.61
SHANK2Q9UPX8 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
SHANK2Q9UPX8 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC5□□□□□ -1.61
SHANK2Q9UPX8 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5□□□□□ -1.61
SHANK2Q9UPX8 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5□□□□□ -1.61
SHANK2Q9UPX8 ZNF826P-207ENST00000622273 1910 ntBASIC5□□□□□ -1.61
SHANK2Q9UPX8 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
SHANK2Q9UPX8 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5□□□□□ -1.61
SHANK2Q9UPX8 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms