Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC7.44□□□□□ -1.22
SHROOM4Q9ULL8 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC7.44□□□□□ -1.22
SHROOM4Q9ULL8 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC7.44□□□□□ -1.22
SHROOM4Q9ULL8 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC7.44□□□□□ -1.22
SHROOM4Q9ULL8 MTND4LP24-201ENST00000572277 291 ntBASIC7.44□□□□□ -1.22
SHROOM4Q9ULL8 AC021851.1-201ENST00000608537 1082 ntBASIC7.44□□□□□ -1.22
SHROOM4Q9ULL8 AL031666.3-201ENST00000609320 1006 ntBASIC7.44□□□□□ -1.22
SHROOM4Q9ULL8 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC7.44□□□□□ -1.22
SHROOM4Q9ULL8 U6.107-201ENST00000637108 79 ntBASIC7.44□□□□□ -1.22
SHROOM4Q9ULL8 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC7.44□□□□□ -1.22
SHROOM4Q9ULL8 HSPA8P19-201ENST00000505359 1517 ntBASIC7.44□□□□□ -1.22
SHROOM4Q9ULL8 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SHROOM4Q9ULL8 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 GCNT6-201ENST00000379591 934 ntBASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 AL122016.1-201ENST00000403365 367 ntBASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 AL512430.2-201ENST00000406786 339 ntBASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 MIR1303-201ENST00000408625 86 ntBASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 MIR1289-1-201ENST00000408836 144 ntBASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 AC092745.2-202ENST00000411880 369 ntBASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 OR4K6P-201ENST00000416478 897 ntBASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 AL139247.1-201ENST00000422768 325 ntBASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 SETP14-201ENST00000497538 873 ntBASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 AP000916.1-201ENST00000533869 835 ntBASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 AC024224.1-201ENST00000538284 609 ntBASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 AC244505.7-201ENST00000599675 272 ntBASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 MKKS-203ENST00000609375 882 ntTSL 2 BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 AC006946.3-201ENST00000609791 756 ntBASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 AC253576.2-201ENST00000618815 580 ntBASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 AC093875.1-201ENST00000623688 504 ntBASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 TEX41-265ENST00000627785 704 ntTSL 5 BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 TEX41-280ENST00000629185 591 ntTSL 5 BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 AL353743.4-201ENST00000422653 1547 ntBASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 RNU1-33P-201ENST00000364249 162 ntBASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 BMS1P3-201ENST00000372011 932 ntBASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 HMGB3P18-201ENST00000406327 590 ntBASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 TRBV8-2-201ENST00000475637 270 ntBASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 MIR3922-201ENST00000585192 84 ntBASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 ABI1P1-201ENST00000603375 1120 ntBASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 AL137843.1-201ENST00000605078 385 ntBASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC7.43□□□□□ -1.22
SHROOM4Q9ULL8 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
SHROOM4Q9ULL8 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC7.42□□□□□ -1.22
SHROOM4Q9ULL8 AL136520.1-201ENST00000600311 1322 ntBASIC7.42□□□□□ -1.22
SHROOM4Q9ULL8 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
SHROOM4Q9ULL8 AC073069.1-201ENST00000428657 441 ntBASIC7.42□□□□□ -1.22
SHROOM4Q9ULL8 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC7.42□□□□□ -1.22
SHROOM4Q9ULL8 AC092641.1-201ENST00000440229 772 ntBASIC7.42□□□□□ -1.22
SHROOM4Q9ULL8 AL158053.1-201ENST00000441503 453 ntBASIC7.42□□□□□ -1.22
SHROOM4Q9ULL8 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC7.42□□□□□ -1.22
SHROOM4Q9ULL8 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC7.42□□□□□ -1.22
SHROOM4Q9ULL8 AC025554.1-201ENST00000505641 188 ntBASIC7.42□□□□□ -1.22
SHROOM4Q9ULL8 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC7.42□□□□□ -1.22
SHROOM4Q9ULL8 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC7.42□□□□□ -1.22
SHROOM4Q9ULL8 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SHROOM4Q9ULL8 AC008759.3-201ENST00000613300 508 ntBASIC7.42□□□□□ -1.22
SHROOM4Q9ULL8 FRG1HP-204ENST00000617940 757 ntBASIC7.42□□□□□ -1.22
SHROOM4Q9ULL8 ATE1-AS1-202ENST00000636460 506 ntBASIC7.42□□□□□ -1.22
SHROOM4Q9ULL8 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC7.41□□□□□ -1.22
SHROOM4Q9ULL8 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SHROOM4Q9ULL8 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SHROOM4Q9ULL8 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
SHROOM4Q9ULL8 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SHROOM4Q9ULL8 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC7.41□□□□□ -1.22
SHROOM4Q9ULL8 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
SHROOM4Q9ULL8 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SHROOM4Q9ULL8 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms