Protein–RNA interactions for Protein: Q9UHL9

GTF2IRD1, General transcription factor II-I repeat domain-containing protein 1, humanhuman

Predictions only

Length 959 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1Q9UHL9 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6□□□□□ -1.45
GTF2IRD1Q9UHL9 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6□□□□□ -1.45
GTF2IRD1Q9UHL9 AC005341.1-201ENST00000571086 708 ntBASIC6□□□□□ -1.45
GTF2IRD1Q9UHL9 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6□□□□□ -1.45
GTF2IRD1Q9UHL9 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC6□□□□□ -1.45
GTF2IRD1Q9UHL9 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC6□□□□□ -1.45
GTF2IRD1Q9UHL9 AC002550.2-201ENST00000621246 394 ntBASIC6□□□□□ -1.45
GTF2IRD1Q9UHL9 AP001784.1-201ENST00000624107 428 ntBASIC6□□□□□ -1.45
GTF2IRD1Q9UHL9 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6□□□□□ -1.45
GTF2IRD1Q9UHL9 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6□□□□□ -1.45
GTF2IRD1Q9UHL9 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6□□□□□ -1.45
GTF2IRD1Q9UHL9 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
GTF2IRD1Q9UHL9 MTCO1P14-201ENST00000441695 1559 ntBASIC6□□□□□ -1.45
GTF2IRD1Q9UHL9 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
GTF2IRD1Q9UHL9 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
GTF2IRD1Q9UHL9 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
GTF2IRD1Q9UHL9 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
GTF2IRD1Q9UHL9 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 AC011933.2-201ENST00000578539 2790 ntBASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 DDX18P4-201ENST00000511690 1966 ntBASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 FRG1BP-201ENST00000278882 761 ntBASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 Y_RNA.1-201ENST00000352915 104 ntBASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 FRG1CP-201ENST00000358464 769 ntBASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 RNY4P34-201ENST00000364779 95 ntBASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 SUGT1P1-201ENST00000379514 476 ntBASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 RNU6-809P-201ENST00000384461 107 ntBASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 Y_RNA.625-201ENST00000411256 107 ntBASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 JKAMPP1-201ENST00000413804 919 ntBASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 HMGB3P20-201ENST00000417997 600 ntBASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 ZNF90P2-204ENST00000419323 1075 ntBASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 AC093162.1-201ENST00000419682 124 ntBASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 BX890604.2-201ENST00000427883 474 ntBASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 AC005534.2-201ENST00000431047 433 ntBASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 FCF1P1-201ENST00000432690 571 ntBASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 UBE2V1P5-201ENST00000440070 405 ntBASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 SDCBPP1-201ENST00000440192 890 ntBASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 RABEPKP1-201ENST00000440529 1026 ntBASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 RPL7P59-201ENST00000447700 943 ntBASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 NIPA2P5-201ENST00000452282 464 ntBASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 RPL7P48-201ENST00000461513 746 ntBASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 snoU109.6-201ENST00000516831 118 ntBASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 RNU6-1261P-201ENST00000517194 104 ntBASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 AP004607.2-201ENST00000533949 322 ntBASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 AL390334.1-201ENST00000556395 450 ntBASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 AL359212.1-201ENST00000556608 614 ntBASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 AC012182.1-201ENST00000570133 895 ntBASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 AC010928.3-201ENST00000587712 541 ntBASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 AC087283.1-201ENST00000604029 1074 ntBASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 BNIP3P10-201ENST00000605360 577 ntBASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 AC090525.3-201ENST00000605601 189 ntBASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 AC090229.1-201ENST00000590983 1609 ntBASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
GTF2IRD1Q9UHL9 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
GTF2IRD1Q9UHL9 OR4F13P-202ENST00000560066 2054 ntBASIC5.98□□□□□ -1.45
GTF2IRD1Q9UHL9 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
GTF2IRD1Q9UHL9 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
GTF2IRD1Q9UHL9 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
GTF2IRD1Q9UHL9 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
GTF2IRD1Q9UHL9 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
GTF2IRD1Q9UHL9 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
GTF2IRD1Q9UHL9 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
GTF2IRD1Q9UHL9 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
GTF2IRD1Q9UHL9 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
GTF2IRD1Q9UHL9 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
GTF2IRD1Q9UHL9 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
GTF2IRD1Q9UHL9 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
GTF2IRD1Q9UHL9 RNU6-462P-201ENST00000362659 105 ntBASIC5.98□□□□□ -1.45
GTF2IRD1Q9UHL9 RNU4-79P-201ENST00000362764 141 ntBASIC5.98□□□□□ -1.45
GTF2IRD1Q9UHL9 Y_RNA.86-201ENST00000363020 111 ntBASIC5.98□□□□□ -1.45
GTF2IRD1Q9UHL9 RNU6-492P-201ENST00000363035 104 ntBASIC5.98□□□□□ -1.45
GTF2IRD1Q9UHL9 RNU6-1085P-201ENST00000363576 107 ntBASIC5.98□□□□□ -1.45
GTF2IRD1Q9UHL9 RNU1-146P-201ENST00000364015 165 ntBASIC5.98□□□□□ -1.45
GTF2IRD1Q9UHL9 RNU6-533P-201ENST00000384144 107 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms