Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 AC080188.3-201ENST00000624842 748 ntBASIC4.43□□□□□ -1.7
SALL1Q9NSC2 AC019080.5-201ENST00000624891 757 ntBASIC4.43□□□□□ -1.7
SALL1Q9NSC2 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.43□□□□□ -1.7
SALL1Q9NSC2 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SALL1Q9NSC2 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.42□□□□□ -1.7
SALL1Q9NSC2 AC007823.1-201ENST00000569932 1566 ntBASIC4.42□□□□□ -1.7
SALL1Q9NSC2 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SALL1Q9NSC2 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SALL1Q9NSC2 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SALL1Q9NSC2 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SALL1Q9NSC2 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SALL1Q9NSC2 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SALL1Q9NSC2 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SALL1Q9NSC2 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SALL1Q9NSC2 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SALL1Q9NSC2 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SALL1Q9NSC2 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SALL1Q9NSC2 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
SALL1Q9NSC2 RNU6-40P-201ENST00000384254 107 ntBASIC4.42□□□□□ -1.7
SALL1Q9NSC2 RNU6-225P-201ENST00000384613 103 ntBASIC4.42□□□□□ -1.7
SALL1Q9NSC2 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
SALL1Q9NSC2 AC099336.2-201ENST00000422457 254 ntBASIC4.42□□□□□ -1.7
SALL1Q9NSC2 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.42□□□□□ -1.7
SALL1Q9NSC2 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.42□□□□□ -1.7
SALL1Q9NSC2 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.42□□□□□ -1.7
SALL1Q9NSC2 AC007563.3-201ENST00000433233 371 ntBASIC4.42□□□□□ -1.7
SALL1Q9NSC2 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SALL1Q9NSC2 HMGB1P16-201ENST00000447155 540 ntBASIC4.42□□□□□ -1.7
SALL1Q9NSC2 AC099560.2-201ENST00000457554 255 ntBASIC4.42□□□□□ -1.7
SALL1Q9NSC2 SNORA59A-201ENST00000459326 152 ntBASIC4.42□□□□□ -1.7
SALL1Q9NSC2 RPL23AP12-201ENST00000467573 473 ntBASIC4.42□□□□□ -1.7
SALL1Q9NSC2 UBA52P3-201ENST00000491303 382 ntBASIC4.42□□□□□ -1.7
SALL1Q9NSC2 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.42□□□□□ -1.7
SALL1Q9NSC2 MTND3P24-201ENST00000506306 329 ntBASIC4.42□□□□□ -1.7
SALL1Q9NSC2 AC008628.1-201ENST00000508663 265 ntBASIC4.42□□□□□ -1.7
SALL1Q9NSC2 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.42□□□□□ -1.7
SALL1Q9NSC2 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.42□□□□□ -1.7
SALL1Q9NSC2 OR8I1P-201ENST00000529291 931 ntBASIC4.42□□□□□ -1.7
SALL1Q9NSC2 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC4.42□□□□□ -1.7
SALL1Q9NSC2 RN7SL339P-201ENST00000580597 296 ntBASIC4.42□□□□□ -1.7
SALL1Q9NSC2 AC005412.1-201ENST00000580812 1049 ntBASIC4.42□□□□□ -1.7
SALL1Q9NSC2 AC010591.1-201ENST00000603941 649 ntBASIC4.42□□□□□ -1.7
SALL1Q9NSC2 AL163642.2-201ENST00000604722 1019 ntBASIC4.42□□□□□ -1.7
SALL1Q9NSC2 AL136370.1-201ENST00000608166 691 ntBASIC4.42□□□□□ -1.7
SALL1Q9NSC2 AC005021.1-201ENST00000608730 355 ntBASIC4.42□□□□□ -1.7
SALL1Q9NSC2 AC135803.1-201ENST00000608748 565 ntBASIC4.42□□□□□ -1.7
SALL1Q9NSC2 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.42□□□□□ -1.7
SALL1Q9NSC2 AL392088.2-201ENST00000637607 285 ntBASIC4.42□□□□□ -1.7
SALL1Q9NSC2 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SALL1Q9NSC2 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.41□□□□□ -1.7
SALL1Q9NSC2 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SALL1Q9NSC2 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SALL1Q9NSC2 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
SALL1Q9NSC2 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.41□□□□□ -1.7
SALL1Q9NSC2 AC017002.4-201ENST00000604721 1525 ntBASIC4.41□□□□□ -1.7
SALL1Q9NSC2 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.41□□□□□ -1.7
SALL1Q9NSC2 AL512283.1-201ENST00000606756 1384 ntBASIC4.41□□□□□ -1.7
SALL1Q9NSC2 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.41□□□□□ -1.7
SALL1Q9NSC2 AC234772.1-201ENST00000377927 937 ntBASIC4.41□□□□□ -1.7
SALL1Q9NSC2 MIR218-2-201ENST00000385006 110 ntBASIC4.41□□□□□ -1.7
SALL1Q9NSC2 AC093719.1-202ENST00000392735 373 ntBASIC4.41□□□□□ -1.7
SALL1Q9NSC2 PTMAP5-201ENST00000393073 333 ntBASIC4.41□□□□□ -1.7
SALL1Q9NSC2 RPS7P15-201ENST00000415804 584 ntBASIC4.41□□□□□ -1.7
SALL1Q9NSC2 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.41□□□□□ -1.7
SALL1Q9NSC2 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.41□□□□□ -1.7
SALL1Q9NSC2 RPL7P4-203ENST00000430239 730 ntBASIC4.41□□□□□ -1.7
SALL1Q9NSC2 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.41□□□□□ -1.7
SALL1Q9NSC2 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.41□□□□□ -1.7
SALL1Q9NSC2 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.41□□□□□ -1.7
SALL1Q9NSC2 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.41□□□□□ -1.7
SALL1Q9NSC2 AC245517.2-201ENST00000442890 346 ntBASIC4.41□□□□□ -1.7
SALL1Q9NSC2 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.41□□□□□ -1.7
SALL1Q9NSC2 EIF4A1P11-201ENST00000451239 222 ntBASIC4.41□□□□□ -1.7
SALL1Q9NSC2 CALM1P2-201ENST00000452941 448 ntBASIC4.41□□□□□ -1.7
SALL1Q9NSC2 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.41□□□□□ -1.7
SALL1Q9NSC2 AC025768.1-201ENST00000510057 267 ntBASIC4.41□□□□□ -1.7
SALL1Q9NSC2 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.41□□□□□ -1.7
SALL1Q9NSC2 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.41□□□□□ -1.7
SALL1Q9NSC2 MTND1P36-201ENST00000522384 936 ntBASIC4.41□□□□□ -1.7
SALL1Q9NSC2 AP003049.1-201ENST00000529418 457 ntBASIC4.41□□□□□ -1.7
SALL1Q9NSC2 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.41□□□□□ -1.7
SALL1Q9NSC2 AC008011.1-201ENST00000545989 227 ntBASIC4.41□□□□□ -1.7
SALL1Q9NSC2 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.41□□□□□ -1.7
SALL1Q9NSC2 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.41□□□□□ -1.7
SALL1Q9NSC2 AC084373.1-201ENST00000603311 235 ntBASIC4.41□□□□□ -1.7
SALL1Q9NSC2 AL671309.1-201ENST00000603750 544 ntBASIC4.41□□□□□ -1.7
SALL1Q9NSC2 AP004372.1-201ENST00000604842 844 ntBASIC4.41□□□□□ -1.7
SALL1Q9NSC2 AC007179.3-201ENST00000604976 235 ntBASIC4.41□□□□□ -1.7
SALL1Q9NSC2 AC018816.2-201ENST00000621460 353 ntBASIC4.41□□□□□ -1.7
SALL1Q9NSC2 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
SALL1Q9NSC2 AL365440.1-201ENST00000436135 2167 ntBASIC4.41□□□□□ -1.7
SALL1Q9NSC2 ASNSP1-201ENST00000518311 1939 ntBASIC4.4□□□□□ -1.7
SALL1Q9NSC2 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SALL1Q9NSC2 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.4□□□□□ -1.7
SALL1Q9NSC2 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SALL1Q9NSC2 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
SALL1Q9NSC2 AC007685.1-201ENST00000329806 452 ntBASIC4.4□□□□□ -1.71
SALL1Q9NSC2 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SALL1Q9NSC2 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SALL1Q9NSC2 SNORD115-48-201ENST00000364764 76 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms