Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 AC067945.1-201ENST00000342609 618 ntBASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 RN7SKP187-201ENST00000365536 330 ntBASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 Y_RNA.367-201ENST00000365544 101 ntBASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 AC092832.1-201ENST00000422934 400 ntBASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 AL121776.1-201ENST00000429337 372 ntBASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 RNU6-1218P-201ENST00000458990 108 ntBASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 Y_RNA.635-201ENST00000459041 101 ntBASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 AC098818.1-201ENST00000478593 252 ntBASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 RPL5P22-201ENST00000480199 884 ntBASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 RPL21P99-201ENST00000480369 423 ntBASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 AC005726.1-201ENST00000494679 427 ntBASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 RNA5SP206-201ENST00000516703 121 ntBASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 Y_RNA.711-201ENST00000516993 102 ntBASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 AC107958.1-201ENST00000556576 290 ntBASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 AL049779.3-201ENST00000557141 606 ntBASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 AP005119.1-201ENST00000580956 292 ntBASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 RNU4ATAC-201ENST00000580972 127 ntBASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 AC060771.1-201ENST00000582031 164 ntBASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 MIR212-201ENST00000586026 110 ntBASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 AC105224.1-201ENST00000587055 421 ntBASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 AC141002.1-201ENST00000607025 279 ntBASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 AP001521.2-201ENST00000608772 546 ntBASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 AL078596.1-201ENST00000624856 447 ntBASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 MTND4LP32-201ENST00000636111 270 ntBASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 AC011416.1-201ENST00000514947 1732 ntBASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC5.81□□□□□ -1.48
BHLHE41Q9C0J9 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 AC018628.1-201ENST00000624147 3819 ntBASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 AKAP17BP-201ENST00000431706 2719 ntBASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 AC022164.1-201ENST00000568767 2673 ntBASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 MSL3P1-202ENST00000440028 1468 ntBASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 RNU5E-8P-201ENST00000363502 116 ntBASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 RNU4-66P-201ENST00000365199 138 ntBASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 Y_RNA.373-201ENST00000365600 103 ntBASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 U3.20-201ENST00000390909 217 ntBASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 AL590233.1-201ENST00000430017 456 ntBASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 AC094019.1-201ENST00000434678 472 ntBASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 AL590399.4-201ENST00000436561 601 ntBASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 AL138899.2-201ENST00000439139 499 ntBASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 RPL7P52-201ENST00000449200 742 ntBASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 AL162739.1-201ENST00000450606 307 ntBASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 AC022431.1-201ENST00000450941 438 ntBASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 AL163540.1-201ENST00000485382 386 ntBASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 RPL23AP40-201ENST00000487630 390 ntBASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 MTCO1P29-201ENST00000496868 288 ntBASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 SNORA25.17-201ENST00000517184 124 ntBASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 NARSP2-201ENST00000518524 679 ntBASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 AC093012.1-202ENST00000549403 582 ntBASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 SETP2-201ENST00000553886 926 ntBASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 MIR4504-201ENST00000577413 92 ntBASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 AC090615.1-201ENST00000577519 154 ntBASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 OR6R2P-201ENST00000609216 300 ntBASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 RN7SL261P-201ENST00000613441 282 ntBASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 uc_338.12-201ENST00000616344 181 ntBASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 AL159972.1-201ENST00000625150 448 ntBASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 AL133216.2-202ENST00000634512 349 ntBASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms