Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.74□□□□□ -1.65
AMBRA1Q9C0C7 AP001784.1-201ENST00000624107 428 ntBASIC4.74□□□□□ -1.65
AMBRA1Q9C0C7 AC231657.1-201ENST00000624313 397 ntBASIC4.74□□□□□ -1.65
AMBRA1Q9C0C7 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
AMBRA1Q9C0C7 CASC19-221ENST00000641309 1382 ntBASIC4.74□□□□□ -1.65
AMBRA1Q9C0C7 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
AMBRA1Q9C0C7 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
AMBRA1Q9C0C7 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
AMBRA1Q9C0C7 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
AMBRA1Q9C0C7 AC025125.1-201ENST00000624743 1922 ntBASIC4.74□□□□□ -1.65
AMBRA1Q9C0C7 AC134882.1-201ENST00000603738 1676 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 CYP1D1P-201ENST00000416662 1433 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 Z95331.1-201ENST00000623075 23112 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 RNU6-433P-201ENST00000363216 104 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 RNU5F-7P-201ENST00000363696 115 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 RNU6-723P-201ENST00000383973 107 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 RNU1-149P-201ENST00000390870 161 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 RNU2-66P-201ENST00000410650 161 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 AC073264.1-201ENST00000411508 416 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 RBMY2KP-201ENST00000418221 992 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 AC009237.2-201ENST00000421358 284 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 FABP7P2-201ENST00000429946 379 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 RPL7L1P9-201ENST00000431298 745 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 BMS1P19-201ENST00000433925 393 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 VN1R54P-201ENST00000435210 1049 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 ACTR3P2-201ENST00000439585 1257 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 CNOT7P2-201ENST00000441051 832 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 AC022431.1-201ENST00000450941 438 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 TPT1P7-201ENST00000458300 517 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 AC091180.1-201ENST00000462104 372 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 AC090686.1-201ENST00000481577 749 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 AC013828.1-201ENST00000481845 158 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 UBA52P7-201ENST00000486088 380 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 RN7SL97P-201ENST00000486780 299 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 RPS21P4-201ENST00000487122 248 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 CEACAMP10-202ENST00000495431 496 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 PGAM1P13-201ENST00000507497 754 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 IGHV3-32-201ENST00000519182 355 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 AC022832.1-201ENST00000530718 645 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 AC136618.2-201ENST00000575091 400 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 AP001004.1-201ENST00000582468 324 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 AC017100.2-201ENST00000584628 355 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 RNF138P2-201ENST00000603490 592 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 AC090186.1-201ENST00000605991 572 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 AP005432.2-201ENST00000608162 586 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 AC068944.2-201ENST00000610373 403 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 AC090510.2-201ENST00000617465 629 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 CR392039.4-201ENST00000624968 501 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 AC074101.1-201ENST00000637861 241 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 MTCO1P14-201ENST00000441695 1559 ntBASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
AMBRA1Q9C0C7 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 AC027228.2-201ENST00000567141 2154 ntBASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 MAPK10-349ENST00000641767 3661 ntBASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 RNU6-462P-201ENST00000362659 105 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms