Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 RNA5SP42-201ENST00000364278 115 ntBASIC5.13□□□□□ -1.59
SCAPERQ9BY12 RN7SKP284-201ENST00000411002 343 ntBASIC5.13□□□□□ -1.59
SCAPERQ9BY12 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SCAPERQ9BY12 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.13□□□□□ -1.59
SCAPERQ9BY12 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
SCAPERQ9BY12 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC5.13□□□□□ -1.59
SCAPERQ9BY12 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC5.13□□□□□ -1.59
SCAPERQ9BY12 VWA8P1-201ENST00000510889 176 ntBASIC5.13□□□□□ -1.59
SCAPERQ9BY12 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.13□□□□□ -1.59
SCAPERQ9BY12 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.13□□□□□ -1.59
SCAPERQ9BY12 OR4R3P-201ENST00000525084 838 ntBASIC5.13□□□□□ -1.59
SCAPERQ9BY12 AC092747.2-201ENST00000545069 983 ntBASIC5.13□□□□□ -1.59
SCAPERQ9BY12 AL133457.1-201ENST00000564251 987 ntBASIC5.13□□□□□ -1.59
SCAPERQ9BY12 AC110801.1-201ENST00000623590 212 ntBASIC5.13□□□□□ -1.59
SCAPERQ9BY12 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SCAPERQ9BY12 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SCAPERQ9BY12 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SCAPERQ9BY12 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SCAPERQ9BY12 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SCAPERQ9BY12 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SCAPERQ9BY12 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SCAPERQ9BY12 RNU1-18P-201ENST00000363062 164 ntBASIC5.12□□□□□ -1.59
SCAPERQ9BY12 MTND4LP20-201ENST00000402379 270 ntBASIC5.12□□□□□ -1.59
SCAPERQ9BY12 AL445213.1-201ENST00000412589 747 ntBASIC5.12□□□□□ -1.59
SCAPERQ9BY12 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.12□□□□□ -1.59
SCAPERQ9BY12 USP12PY-201ENST00000427677 1064 ntBASIC5.12□□□□□ -1.59
SCAPERQ9BY12 AC084357.1-201ENST00000473404 255 ntBASIC5.12□□□□□ -1.59
SCAPERQ9BY12 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC5.12□□□□□ -1.59
SCAPERQ9BY12 AC006557.5-201ENST00000603126 811 ntBASIC5.12□□□□□ -1.59
SCAPERQ9BY12 RNVU1-4-201ENST00000612985 164 ntBASIC5.12□□□□□ -1.59
SCAPERQ9BY12 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC5.12□□□□□ -1.59
SCAPERQ9BY12 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
SCAPERQ9BY12 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
SCAPERQ9BY12 AC027287.1-201ENST00000553115 1453 ntBASIC5.11□□□□□ -1.59
SCAPERQ9BY12 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SCAPERQ9BY12 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SCAPERQ9BY12 AL138885.1-201ENST00000405921 675 ntBASIC5.11□□□□□ -1.59
SCAPERQ9BY12 RPL23AP69-201ENST00000431134 458 ntBASIC5.11□□□□□ -1.59
SCAPERQ9BY12 AL353705.1-201ENST00000433468 480 ntBASIC5.11□□□□□ -1.59
SCAPERQ9BY12 HMGB3P9-201ENST00000441799 583 ntBASIC5.11□□□□□ -1.59
SCAPERQ9BY12 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.11□□□□□ -1.59
SCAPERQ9BY12 AC069499.1-201ENST00000489433 509 ntBASIC5.11□□□□□ -1.59
SCAPERQ9BY12 AC004069.2-201ENST00000505438 1114 ntBASIC5.11□□□□□ -1.59
SCAPERQ9BY12 BTF3L4P4-201ENST00000506381 449 ntBASIC5.11□□□□□ -1.59
SCAPERQ9BY12 AC138409.2-202ENST00000507274 458 ntBASIC5.11□□□□□ -1.59
SCAPERQ9BY12 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SCAPERQ9BY12 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.11□□□□□ -1.59
SCAPERQ9BY12 KLKP1-201ENST00000595979 403 ntBASIC5.11□□□□□ -1.59
SCAPERQ9BY12 AC025946.2-201ENST00000603398 234 ntBASIC5.11□□□□□ -1.59
SCAPERQ9BY12 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SCAPERQ9BY12 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SCAPERQ9BY12 AC233263.6-201ENST00000631132 1963 ntBASIC5.11□□□□□ -1.59
SCAPERQ9BY12 PROS2P-201ENST00000474651 1951 ntBASIC5.1□□□□□ -1.59
SCAPERQ9BY12 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
SCAPERQ9BY12 RPL23AP48-201ENST00000406913 488 ntBASIC5.1□□□□□ -1.59
SCAPERQ9BY12 RAC1P3-201ENST00000416129 580 ntBASIC5.1□□□□□ -1.59
SCAPERQ9BY12 MOB1AP1-201ENST00000430903 535 ntBASIC5.1□□□□□ -1.59
SCAPERQ9BY12 RPL12P46-201ENST00000436610 195 ntBASIC5.1□□□□□ -1.59
SCAPERQ9BY12 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC5.1□□□□□ -1.59
SCAPERQ9BY12 AL356535.1-201ENST00000440335 398 ntBASIC5.1□□□□□ -1.59
SCAPERQ9BY12 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.1□□□□□ -1.59
SCAPERQ9BY12 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.1□□□□□ -1.59
SCAPERQ9BY12 AC008489.1-201ENST00000524271 483 ntBASIC5.1□□□□□ -1.59
SCAPERQ9BY12 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SCAPERQ9BY12 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC5.1□□□□□ -1.59
SCAPERQ9BY12 DLD-214ENST00000639772 421 ntTSL 5 BASIC5.1□□□□□ -1.59
SCAPERQ9BY12 AC018529.3-201ENST00000624212 2254 ntBASIC5.1□□□□□ -1.59
SCAPERQ9BY12 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SCAPERQ9BY12 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SCAPERQ9BY12 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC5.1□□□□□ -1.59
SCAPERQ9BY12 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.09□□□□□ -1.59
SCAPERQ9BY12 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SCAPERQ9BY12 RNA5SP80-201ENST00000410475 111 ntBASIC5.09□□□□□ -1.59
SCAPERQ9BY12 MTND4P22-201ENST00000413116 1169 ntBASIC5.09□□□□□ -1.59
SCAPERQ9BY12 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.09□□□□□ -1.59
SCAPERQ9BY12 RPL7P28-201ENST00000437739 740 ntBASIC5.09□□□□□ -1.59
SCAPERQ9BY12 ANP32BP2-201ENST00000454525 545 ntBASIC5.09□□□□□ -1.59
SCAPERQ9BY12 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.09□□□□□ -1.59
SCAPERQ9BY12 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.09□□□□□ -1.59
SCAPERQ9BY12 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.09□□□□□ -1.59
SCAPERQ9BY12 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.09□□□□□ -1.59
SCAPERQ9BY12 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.09□□□□□ -1.59
SCAPERQ9BY12 BMS1P21-201ENST00000634565 365 ntBASIC5.09□□□□□ -1.59
SCAPERQ9BY12 TTC39DP-201ENST00000416781 1688 ntBASIC5.09□□□□□ -1.59
SCAPERQ9BY12 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
SCAPERQ9BY12 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SCAPERQ9BY12 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SCAPERQ9BY12 OR5H2-201ENST00000355273 945 ntBASIC5.08□□□□□ -1.6
SCAPERQ9BY12 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SCAPERQ9BY12 SNORA5B-201ENST00000363786 132 ntBASIC5.08□□□□□ -1.6
SCAPERQ9BY12 CRP-203ENST00000368111 512 ntTSL 3 BASIC5.08□□□□□ -1.6
SCAPERQ9BY12 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.08□□□□□ -1.6
SCAPERQ9BY12 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.08□□□□□ -1.6
SCAPERQ9BY12 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC5.08□□□□□ -1.6
SCAPERQ9BY12 AC112198.1-201ENST00000505369 1220 ntBASIC5.08□□□□□ -1.6
SCAPERQ9BY12 AP006245.1-201ENST00000522549 120 ntBASIC5.08□□□□□ -1.6
SCAPERQ9BY12 AC022080.3-201ENST00000544433 482 ntBASIC5.08□□□□□ -1.6
SCAPERQ9BY12 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC5.08□□□□□ -1.6
SCAPERQ9BY12 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.08□□□□□ -1.6
SCAPERQ9BY12 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms