Protein–RNA interactions for Protein: Q9BY11

PACSIN1, Protein kinase C and casein kinase substrate in neurons protein 1, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1Q9BY11 AC005532.2-201ENST00000467154 373 ntBASIC5.06□□□□□ -1.6
PACSIN1Q9BY11 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.06□□□□□ -1.6
PACSIN1Q9BY11 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.06□□□□□ -1.6
PACSIN1Q9BY11 HMGB1P28-201ENST00000507778 552 ntBASIC5.06□□□□□ -1.6
PACSIN1Q9BY11 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
PACSIN1Q9BY11 AC027309.2-201ENST00000520566 192 ntBASIC5.06□□□□□ -1.6
PACSIN1Q9BY11 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC5.06□□□□□ -1.6
PACSIN1Q9BY11 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.06□□□□□ -1.6
PACSIN1Q9BY11 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.06□□□□□ -1.6
PACSIN1Q9BY11 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PACSIN1Q9BY11 AP000873.5-201ENST00000533906 236 ntBASIC5.06□□□□□ -1.6
PACSIN1Q9BY11 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.06□□□□□ -1.6
PACSIN1Q9BY11 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC5.06□□□□□ -1.6
PACSIN1Q9BY11 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.06□□□□□ -1.6
PACSIN1Q9BY11 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.06□□□□□ -1.6
PACSIN1Q9BY11 RN7SL802P-201ENST00000577858 299 ntBASIC5.06□□□□□ -1.6
PACSIN1Q9BY11 ZNF415P1-201ENST00000582279 1166 ntBASIC5.06□□□□□ -1.6
PACSIN1Q9BY11 AC020914.6-201ENST00000594327 272 ntBASIC5.06□□□□□ -1.6
PACSIN1Q9BY11 AC008687.2-201ENST00000597865 520 ntBASIC5.06□□□□□ -1.6
PACSIN1Q9BY11 AC128687.1-201ENST00000605304 619 ntBASIC5.06□□□□□ -1.6
PACSIN1Q9BY11 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PACSIN1Q9BY11 AC009509.4-201ENST00000619202 509 ntBASIC5.06□□□□□ -1.6
PACSIN1Q9BY11 AL590240.3-201ENST00000621416 943 ntBASIC5.06□□□□□ -1.6
PACSIN1Q9BY11 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.06□□□□□ -1.6
PACSIN1Q9BY11 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.06□□□□□ -1.6
PACSIN1Q9BY11 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PACSIN1Q9BY11 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PACSIN1Q9BY11 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PACSIN1Q9BY11 NEAT1-202ENST00000501122 22743 ntBASIC5.06□□□□□ -1.6
PACSIN1Q9BY11 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.06□□□□□ -1.6
PACSIN1Q9BY11 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
PACSIN1Q9BY11 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
PACSIN1Q9BY11 AL356473.1-201ENST00000406203 1408 ntBASIC5.06□□□□□ -1.6
PACSIN1Q9BY11 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 AL121657.1-201ENST00000327215 531 ntBASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 Y_RNA.25-201ENST00000362528 102 ntBASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 RN7SKP95-201ENST00000362860 303 ntBASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 Z97832.1-201ENST00000402490 328 ntBASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 AL450338.1-201ENST00000407987 512 ntBASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 SNORA11.3-201ENST00000408471 128 ntBASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 AP000534.2-201ENST00000412729 568 ntBASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 AC004022.2-201ENST00000413824 193 ntBASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 RBMY2KP-201ENST00000418221 992 ntBASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 CYCSP46-201ENST00000423569 204 ntBASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 OR5BE1P-201ENST00000425977 939 ntBASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 LARP1BP3-201ENST00000437229 869 ntBASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 FHP1-201ENST00000442741 703 ntBASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 ARPC3P2-201ENST00000457786 533 ntBASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 RNU6-1218P-201ENST00000458990 108 ntBASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 AC108078.3-201ENST00000502633 489 ntBASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 AC140172.1-201ENST00000502928 141 ntBASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 RN7SKP147-201ENST00000517154 244 ntBASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 AC022832.1-201ENST00000530718 645 ntBASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 AC107918.3-201ENST00000533272 382 ntBASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 OR6C7P-201ENST00000547875 934 ntBASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 MIR5699-201ENST00000578903 90 ntBASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 MIR4310-201ENST00000582950 57 ntBASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 AL021997.1-201ENST00000605757 193 ntBASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 COX6CP4-201ENST00000605798 228 ntBASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 AC239868.4-201ENST00000608318 671 ntBASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 SNORD91B-202ENST00000608459 222 ntBASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 AC005332.10-201ENST00000612725 619 ntBASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 SNORA11.6-201ENST00000619030 128 ntBASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 AC099842.1-201ENST00000619919 596 ntBASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 AC026634.1-201ENST00000634369 198 ntBASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 OR5BE1P-202ENST00000641168 1176 ntBASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 ATP8A2P3-201ENST00000426792 1536 ntBASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PACSIN1Q9BY11 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms