Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC092851.1-201ENST00000535964 478 ntBASIC4.44□□□□□ -1.7
RPAP1Q9BWH6 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.44□□□□□ -1.7
RPAP1Q9BWH6 AC037471.2-201ENST00000564941 598 ntBASIC4.44□□□□□ -1.7
RPAP1Q9BWH6 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.44□□□□□ -1.7
RPAP1Q9BWH6 AC067852.7-201ENST00000623270 535 ntBASIC4.44□□□□□ -1.7
RPAP1Q9BWH6 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.44□□□□□ -1.7
RPAP1Q9BWH6 AP000553.6-201ENST00000641242 118 ntBASIC4.44□□□□□ -1.7
RPAP1Q9BWH6 AC119674.1-207ENST00000641355 633 ntBASIC4.44□□□□□ -1.7
RPAP1Q9BWH6 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RPAP1Q9BWH6 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.44□□□□□ -1.7
RPAP1Q9BWH6 AC095050.2-201ENST00000510748 1458 ntBASIC4.44□□□□□ -1.7
RPAP1Q9BWH6 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RPAP1Q9BWH6 HSPA8P1-201ENST00000425843 1833 ntBASIC4.44□□□□□ -1.7
RPAP1Q9BWH6 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RPAP1Q9BWH6 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.43□□□□□ -1.7
RPAP1Q9BWH6 RNU6-819P-201ENST00000364116 107 ntBASIC4.43□□□□□ -1.7
RPAP1Q9BWH6 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.43□□□□□ -1.7
RPAP1Q9BWH6 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.43□□□□□ -1.7
RPAP1Q9BWH6 XKRYP6-201ENST00000440468 1116 ntBASIC4.43□□□□□ -1.7
RPAP1Q9BWH6 XKRYP3-201ENST00000442113 1116 ntBASIC4.43□□□□□ -1.7
RPAP1Q9BWH6 AC104629.2-201ENST00000468627 598 ntBASIC4.43□□□□□ -1.7
RPAP1Q9BWH6 RN7SKP13-201ENST00000515933 244 ntBASIC4.43□□□□□ -1.7
RPAP1Q9BWH6 OR5B10P-201ENST00000532869 642 ntBASIC4.43□□□□□ -1.7
RPAP1Q9BWH6 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.43□□□□□ -1.7
RPAP1Q9BWH6 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
RPAP1Q9BWH6 AC011471.1-201ENST00000585766 187 ntBASIC4.43□□□□□ -1.7
RPAP1Q9BWH6 ELOCP35-201ENST00000604289 336 ntBASIC4.43□□□□□ -1.7
RPAP1Q9BWH6 AL163642.2-201ENST00000604722 1019 ntBASIC4.43□□□□□ -1.7
RPAP1Q9BWH6 HMGB1P51-201ENST00000605166 638 ntBASIC4.43□□□□□ -1.7
RPAP1Q9BWH6 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.43□□□□□ -1.7
RPAP1Q9BWH6 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.43□□□□□ -1.7
RPAP1Q9BWH6 AL392088.2-201ENST00000637607 285 ntBASIC4.43□□□□□ -1.7
RPAP1Q9BWH6 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
RPAP1Q9BWH6 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RPAP1Q9BWH6 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RPAP1Q9BWH6 MTND4P10-201ENST00000446199 1363 ntBASIC4.43□□□□□ -1.7
RPAP1Q9BWH6 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RPAP1Q9BWH6 AC008725.1-201ENST00000605123 2263 ntBASIC4.43□□□□□ -1.7
RPAP1Q9BWH6 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.43□□□□□ -1.7
RPAP1Q9BWH6 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RPAP1Q9BWH6 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RPAP1Q9BWH6 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RPAP1Q9BWH6 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RPAP1Q9BWH6 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RPAP1Q9BWH6 RNVU1-14-201ENST00000384770 164 ntBASIC4.42□□□□□ -1.7
RPAP1Q9BWH6 MIR218-2-201ENST00000385006 110 ntBASIC4.42□□□□□ -1.7
RPAP1Q9BWH6 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.42□□□□□ -1.7
RPAP1Q9BWH6 AL645931.1-201ENST00000439737 410 ntBASIC4.42□□□□□ -1.7
RPAP1Q9BWH6 EXTL2P1-201ENST00000446218 416 ntBASIC4.42□□□□□ -1.7
RPAP1Q9BWH6 AC008155.2-201ENST00000464337 397 ntBASIC4.42□□□□□ -1.7
RPAP1Q9BWH6 OR52A4P-203ENST00000498233 1014 ntBASIC4.42□□□□□ -1.7
RPAP1Q9BWH6 HAUS1P1-201ENST00000505275 832 ntBASIC4.42□□□□□ -1.7
RPAP1Q9BWH6 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.42□□□□□ -1.7
RPAP1Q9BWH6 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.42□□□□□ -1.7
RPAP1Q9BWH6 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.42□□□□□ -1.7
RPAP1Q9BWH6 CYP2C60P-201ENST00000566088 139 ntBASIC4.42□□□□□ -1.7
RPAP1Q9BWH6 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.42□□□□□ -1.7
RPAP1Q9BWH6 AC084373.1-201ENST00000603311 235 ntBASIC4.42□□□□□ -1.7
RPAP1Q9BWH6 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.42□□□□□ -1.7
RPAP1Q9BWH6 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
RPAP1Q9BWH6 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
RPAP1Q9BWH6 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RPAP1Q9BWH6 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
RPAP1Q9BWH6 AC007342.7-201ENST00000624610 2337 ntBASIC4.42□□□□□ -1.7
RPAP1Q9BWH6 AC073073.2-201ENST00000609827 2578 ntBASIC4.42□□□□□ -1.7
RPAP1Q9BWH6 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
RPAP1Q9BWH6 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 RNU6-178P-201ENST00000384631 104 ntBASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 DHFRP5-201ENST00000406944 564 ntBASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 Z92545.1-201ENST00000411782 234 ntBASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 OR6K4P-201ENST00000423179 955 ntBASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 HSFY1P1-201ENST00000423928 1178 ntBASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 AL365396.1-201ENST00000430854 671 ntBASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 MTCYBP29-201ENST00000436327 1006 ntBASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 ARL5AP3-201ENST00000439327 386 ntBASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 AC099563.1-201ENST00000456086 418 ntBASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 SNORA59A-201ENST00000459326 152 ntBASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 GMPSP1-201ENST00000514075 579 ntBASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 RNU6-551P-201ENST00000516661 103 ntBASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 NPM1P35-201ENST00000533043 868 ntBASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 AC008011.1-201ENST00000545989 227 ntBASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 AC006504.1-201ENST00000562493 3666 ntBASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 KLKP1-201ENST00000595979 403 ntBASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 AL031985.2-201ENST00000600955 480 ntBASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 AC243654.2-201ENST00000612843 443 ntBASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 uc_338.32-201ENST00000615087 172 ntBASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 AC244258.1-201ENST00000637553 1071 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms