Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SMOQ99835 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SMOQ99835 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SMOQ99835 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SMOQ99835 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.97□□□□□ -1.61
SMOQ99835 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SMOQ99835 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SMOQ99835 CDR1-202ENST00000625883 1485 ntBASIC4.97□□□□□ -1.61
SMOQ99835 TCP11X1-202ENST00000622971 1372 ntBASIC4.97□□□□□ -1.61
SMOQ99835 RNU6-374P-201ENST00000364146 108 ntBASIC4.97□□□□□ -1.61
SMOQ99835 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SMOQ99835 NPM1P40-201ENST00000412758 733 ntBASIC4.97□□□□□ -1.61
SMOQ99835 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.97□□□□□ -1.61
SMOQ99835 AC234782.4-201ENST00000417646 1048 ntBASIC4.97□□□□□ -1.61
SMOQ99835 AC140479.3-201ENST00000418944 1126 ntBASIC4.97□□□□□ -1.61
SMOQ99835 CYCSP46-201ENST00000423569 204 ntBASIC4.97□□□□□ -1.61
SMOQ99835 CKS1BP6-201ENST00000424932 240 ntBASIC4.97□□□□□ -1.61
SMOQ99835 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.97□□□□□ -1.61
SMOQ99835 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.97□□□□□ -1.61
SMOQ99835 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.97□□□□□ -1.61
SMOQ99835 AC004938.1-201ENST00000438468 308 ntBASIC4.97□□□□□ -1.61
SMOQ99835 AC004865.1-201ENST00000442276 1003 ntBASIC4.97□□□□□ -1.61
SMOQ99835 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.97□□□□□ -1.61
SMOQ99835 NF1P3-201ENST00000457709 450 ntBASIC4.97□□□□□ -1.61
SMOQ99835 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.97□□□□□ -1.61
SMOQ99835 AC112206.1-201ENST00000468416 477 ntBASIC4.97□□□□□ -1.61
SMOQ99835 RN7SL354P-201ENST00000469282 294 ntBASIC4.97□□□□□ -1.61
SMOQ99835 UBA52P3-201ENST00000491303 382 ntBASIC4.97□□□□□ -1.61
SMOQ99835 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.97□□□□□ -1.61
SMOQ99835 RPL23AP72-201ENST00000492447 435 ntBASIC4.97□□□□□ -1.61
SMOQ99835 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.97□□□□□ -1.61
SMOQ99835 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.97□□□□□ -1.61
SMOQ99835 RNU6-1261P-201ENST00000517194 104 ntBASIC4.97□□□□□ -1.61
SMOQ99835 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.97□□□□□ -1.61
SMOQ99835 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.97□□□□□ -1.61
SMOQ99835 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.97□□□□□ -1.61
SMOQ99835 AP002963.1-201ENST00000530590 184 ntBASIC4.97□□□□□ -1.61
SMOQ99835 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SMOQ99835 AL390334.1-201ENST00000556395 450 ntBASIC4.97□□□□□ -1.61
SMOQ99835 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.97□□□□□ -1.61
SMOQ99835 AL512347.1-201ENST00000566420 503 ntBASIC4.97□□□□□ -1.61
SMOQ99835 AC010546.1-201ENST00000569391 485 ntBASIC4.97□□□□□ -1.61
SMOQ99835 AC115085.1-201ENST00000588924 229 ntBASIC4.97□□□□□ -1.61
SMOQ99835 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SMOQ99835 AC104785.1-201ENST00000603220 588 ntBASIC4.97□□□□□ -1.61
SMOQ99835 AC091488.1-201ENST00000604239 660 ntBASIC4.97□□□□□ -1.61
SMOQ99835 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SMOQ99835 AC015914.2-201ENST00000618167 288 ntBASIC4.97□□□□□ -1.61
SMOQ99835 AC073968.1-201ENST00000618594 637 ntBASIC4.97□□□□□ -1.61
SMOQ99835 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.97□□□□□ -1.61
SMOQ99835 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SMOQ99835 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.97□□□□□ -1.61
SMOQ99835 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
SMOQ99835 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.97□□□□□ -1.61
SMOQ99835 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SMOQ99835 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SMOQ99835 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SMOQ99835 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SMOQ99835 MAPK10-263ENST00000641052 4307 ntBASIC4.96□□□□□ -1.61
SMOQ99835 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SMOQ99835 AC025574.1-201ENST00000554784 1653 ntBASIC4.96□□□□□ -1.61
SMOQ99835 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.96□□□□□ -1.62
SMOQ99835 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SMOQ99835 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SMOQ99835 AL121657.1-201ENST00000327215 531 ntBASIC4.96□□□□□ -1.62
SMOQ99835 Y_RNA.302-201ENST00000364997 102 ntBASIC4.96□□□□□ -1.62
SMOQ99835 SNORA56-201ENST00000383966 129 ntBASIC4.96□□□□□ -1.62
SMOQ99835 MIR192-201ENST00000384915 110 ntBASIC4.96□□□□□ -1.62
SMOQ99835 DEFB108C-201ENST00000400154 252 ntBASIC4.96□□□□□ -1.62
SMOQ99835 RPS16P5-201ENST00000406501 404 ntBASIC4.96□□□□□ -1.62
SMOQ99835 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.96□□□□□ -1.62
SMOQ99835 AL663109.1-201ENST00000411498 844 ntBASIC4.96□□□□□ -1.62
SMOQ99835 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.96□□□□□ -1.62
SMOQ99835 RPL23AP39-201ENST00000415533 405 ntBASIC4.96□□□□□ -1.62
SMOQ99835 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.96□□□□□ -1.62
SMOQ99835 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.96□□□□□ -1.62
SMOQ99835 PRELID3BP10-201ENST00000431957 584 ntBASIC4.96□□□□□ -1.62
SMOQ99835 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
SMOQ99835 LARP1BP3-201ENST00000437229 869 ntBASIC4.96□□□□□ -1.62
SMOQ99835 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.96□□□□□ -1.62
SMOQ99835 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.96□□□□□ -1.62
SMOQ99835 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.96□□□□□ -1.62
SMOQ99835 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.96□□□□□ -1.62
SMOQ99835 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SMOQ99835 AC002553.2-201ENST00000453217 340 ntBASIC4.96□□□□□ -1.62
SMOQ99835 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.96□□□□□ -1.62
SMOQ99835 USP9YP10-201ENST00000454868 628 ntBASIC4.96□□□□□ -1.62
SMOQ99835 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.96□□□□□ -1.62
SMOQ99835 ARPC3P2-201ENST00000457786 533 ntBASIC4.96□□□□□ -1.62
SMOQ99835 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
SMOQ99835 USP9YP5-201ENST00000511770 630 ntBASIC4.96□□□□□ -1.62
SMOQ99835 SNORA48.10-201ENST00000516965 160 ntBASIC4.96□□□□□ -1.62
SMOQ99835 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.96□□□□□ -1.62
SMOQ99835 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.96□□□□□ -1.62
SMOQ99835 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SMOQ99835 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.96□□□□□ -1.62
SMOQ99835 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SMOQ99835 OR6C7P-201ENST00000547875 934 ntBASIC4.96□□□□□ -1.62
SMOQ99835 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.96□□□□□ -1.62
SMOQ99835 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms