Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 NUP35P1-201ENST00000422734 947 ntBASIC4.38□□□□□ -1.71
ABCA3Q99758 AL121890.1-201ENST00000435457 205 ntBASIC4.38□□□□□ -1.71
ABCA3Q99758 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.38□□□□□ -1.71
ABCA3Q99758 SEPT14P1-201ENST00000458703 648 ntBASIC4.38□□□□□ -1.71
ABCA3Q99758 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.38□□□□□ -1.71
ABCA3Q99758 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.38□□□□□ -1.71
ABCA3Q99758 IGHV3-63-201ENST00000518422 341 ntBASIC4.38□□□□□ -1.71
ABCA3Q99758 BDH2P1-201ENST00000602288 736 ntBASIC4.38□□□□□ -1.71
ABCA3Q99758 AC103881.1-201ENST00000603476 538 ntBASIC4.38□□□□□ -1.71
ABCA3Q99758 AC006946.3-201ENST00000609791 756 ntBASIC4.38□□□□□ -1.71
ABCA3Q99758 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
ABCA3Q99758 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ABCA3Q99758 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ABCA3Q99758 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ABCA3Q99758 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
ABCA3Q99758 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ABCA3Q99758 BTBD10P1-201ENST00000549824 1352 ntBASIC4.38□□□□□ -1.71
ABCA3Q99758 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ABCA3Q99758 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ABCA3Q99758 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ABCA3Q99758 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.38□□□□□ -1.71
ABCA3Q99758 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ABCA3Q99758 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.38□□□□□ -1.71
ABCA3Q99758 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.38□□□□□ -1.71
ABCA3Q99758 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC4.38□□□□□ -1.71
ABCA3Q99758 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.38□□□□□ -1.71
ABCA3Q99758 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC4.38□□□□□ -1.71
ABCA3Q99758 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.38□□□□□ -1.71
ABCA3Q99758 Y_RNA.638-201ENST00000459374 113 ntBASIC4.38□□□□□ -1.71
ABCA3Q99758 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.38□□□□□ -1.71
ABCA3Q99758 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.38□□□□□ -1.71
ABCA3Q99758 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.38□□□□□ -1.71
ABCA3Q99758 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.38□□□□□ -1.71
ABCA3Q99758 uc_338.25-201ENST00000613756 156 ntBASIC4.38□□□□□ -1.71
ABCA3Q99758 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.38□□□□□ -1.71
ABCA3Q99758 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
ABCA3Q99758 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
ABCA3Q99758 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC4.38□□□□□ -1.71
ABCA3Q99758 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ABCA3Q99758 AL132656.3-201ENST00000606384 1595 ntBASIC4.37□□□□□ -1.71
ABCA3Q99758 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.37□□□□□ -1.71
ABCA3Q99758 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ABCA3Q99758 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.37□□□□□ -1.71
ABCA3Q99758 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
ABCA3Q99758 SNORD67-201ENST00000390833 111 ntBASIC4.37□□□□□ -1.71
ABCA3Q99758 RPL32P28-201ENST00000443577 397 ntBASIC4.37□□□□□ -1.71
ABCA3Q99758 HMGB1P5-202ENST00000451497 985 ntBASIC4.37□□□□□ -1.71
ABCA3Q99758 DNAJC19P8-201ENST00000452887 259 ntBASIC4.37□□□□□ -1.71
ABCA3Q99758 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.37□□□□□ -1.71
ABCA3Q99758 AL512310.1-201ENST00000548639 172 ntBASIC4.37□□□□□ -1.71
ABCA3Q99758 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.37□□□□□ -1.71
ABCA3Q99758 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.37□□□□□ -1.71
ABCA3Q99758 UBL5P2-201ENST00000583788 219 ntBASIC4.37□□□□□ -1.71
ABCA3Q99758 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.37□□□□□ -1.71
ABCA3Q99758 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.37□□□□□ -1.71
ABCA3Q99758 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
ABCA3Q99758 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ABCA3Q99758 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ABCA3Q99758 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
ABCA3Q99758 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ABCA3Q99758 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
ABCA3Q99758 SETP15-201ENST00000412724 337 ntBASIC4.36□□□□□ -1.71
ABCA3Q99758 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.36□□□□□ -1.71
ABCA3Q99758 AC073587.1-201ENST00000447093 876 ntBASIC4.36□□□□□ -1.71
ABCA3Q99758 RPL21P6-201ENST00000479171 504 ntBASIC4.36□□□□□ -1.71
ABCA3Q99758 RPS3AP50-201ENST00000487064 803 ntBASIC4.36□□□□□ -1.71
ABCA3Q99758 HMGB3P14-201ENST00000494195 599 ntBASIC4.36□□□□□ -1.71
ABCA3Q99758 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.36□□□□□ -1.71
ABCA3Q99758 SCARNA20.6-201ENST00000517251 106 ntBASIC4.36□□□□□ -1.71
ABCA3Q99758 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.36□□□□□ -1.71
ABCA3Q99758 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.36□□□□□ -1.71
ABCA3Q99758 MIR4319-201ENST00000577285 85 ntBASIC4.36□□□□□ -1.71
ABCA3Q99758 AL049844.2-201ENST00000604280 628 ntBASIC4.36□□□□□ -1.71
ABCA3Q99758 AL162713.1-201ENST00000604480 262 ntBASIC4.36□□□□□ -1.71
ABCA3Q99758 BNIP3P10-201ENST00000605360 577 ntBASIC4.36□□□□□ -1.71
ABCA3Q99758 ATP1B3P1-201ENST00000605365 821 ntBASIC4.36□□□□□ -1.71
ABCA3Q99758 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.36□□□□□ -1.71
ABCA3Q99758 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.36□□□□□ -1.71
ABCA3Q99758 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ABCA3Q99758 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.36□□□□□ -1.71
ABCA3Q99758 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ABCA3Q99758 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.36□□□□□ -1.71
ABCA3Q99758 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.36□□□□□ -1.71
ABCA3Q99758 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.35□□□□□ -1.71
ABCA3Q99758 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ABCA3Q99758 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
ABCA3Q99758 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
ABCA3Q99758 ARF4P3-201ENST00000397387 509 ntBASIC4.35□□□□□ -1.71
ABCA3Q99758 RPL5P18-201ENST00000406671 891 ntBASIC4.35□□□□□ -1.71
ABCA3Q99758 AL135938.1-201ENST00000443141 297 ntBASIC4.35□□□□□ -1.71
ABCA3Q99758 RPL7P59-201ENST00000447700 943 ntBASIC4.35□□□□□ -1.71
ABCA3Q99758 S100A11P1-201ENST00000477525 312 ntBASIC4.35□□□□□ -1.71
ABCA3Q99758 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.35□□□□□ -1.71
ABCA3Q99758 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.35□□□□□ -1.71
ABCA3Q99758 AL158062.1-201ENST00000619632 745 ntBASIC4.35□□□□□ -1.71
ABCA3Q99758 AL513302.2-201ENST00000562313 1842 ntBASIC4.35□□□□□ -1.71
ABCA3Q99758 PROS2P-201ENST00000474651 1951 ntBASIC4.35□□□□□ -1.71
ABCA3Q99758 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
ABCA3Q99758 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ABCA3Q99758 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms