Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.36□□□□□ -1.87
LITAFQ99732 TMEM251P1-201ENST00000503717 318 ntBASIC3.36□□□□□ -1.87
LITAFQ99732 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.36□□□□□ -1.87
LITAFQ99732 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LITAFQ99732 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC3.36□□□□□ -1.87
LITAFQ99732 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.36□□□□□ -1.87
LITAFQ99732 AC018797.3-201ENST00000513388 1241 ntBASIC3.36□□□□□ -1.87
LITAFQ99732 RFPL4AP5-201ENST00000514977 504 ntBASIC3.36□□□□□ -1.87
LITAFQ99732 RNA5SP360-201ENST00000516555 118 ntBASIC3.36□□□□□ -1.87
LITAFQ99732 RNA5SP438-201ENST00000516561 112 ntBASIC3.36□□□□□ -1.87
LITAFQ99732 AC022882.1-201ENST00000532142 501 ntBASIC3.36□□□□□ -1.87
LITAFQ99732 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC3.36□□□□□ -1.87
LITAFQ99732 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.36□□□□□ -1.87
LITAFQ99732 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC3.36□□□□□ -1.87
LITAFQ99732 AL133241.1-201ENST00000556832 487 ntBASIC3.36□□□□□ -1.87
LITAFQ99732 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.36□□□□□ -1.87
LITAFQ99732 HSPE1P3-201ENST00000559254 309 ntBASIC3.36□□□□□ -1.87
LITAFQ99732 ATP5J2P6-201ENST00000565203 266 ntBASIC3.36□□□□□ -1.87
LITAFQ99732 MT1CP-201ENST00000567054 174 ntBASIC3.36□□□□□ -1.87
LITAFQ99732 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.36□□□□□ -1.87
LITAFQ99732 MIR544B-201ENST00000582372 78 ntBASIC3.36□□□□□ -1.87
LITAFQ99732 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.36□□□□□ -1.87
LITAFQ99732 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.36□□□□□ -1.87
LITAFQ99732 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC3.36□□□□□ -1.87
LITAFQ99732 AP002360.4-201ENST00000606980 481 ntBASIC3.36□□□□□ -1.87
LITAFQ99732 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.36□□□□□ -1.87
LITAFQ99732 AC024941.1-201ENST00000612250 334 ntBASIC3.36□□□□□ -1.87
LITAFQ99732 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC3.36□□□□□ -1.87
LITAFQ99732 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.36□□□□□ -1.87
LITAFQ99732 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.36□□□□□ -1.87
LITAFQ99732 uc_338.31-201ENST00000615595 186 ntBASIC3.36□□□□□ -1.87
LITAFQ99732 U6.101-201ENST00000637707 76 ntBASIC3.36□□□□□ -1.87
LITAFQ99732 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LITAFQ99732 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LITAFQ99732 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.36□□□□□ -1.87
LITAFQ99732 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LITAFQ99732 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.36□□□□□ -1.87
LITAFQ99732 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
LITAFQ99732 AC005332.5-201ENST00000591222 2919 ntBASIC3.36□□□□□ -1.87
LITAFQ99732 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
LITAFQ99732 AC009643.2-201ENST00000603543 1448 ntBASIC3.36□□□□□ -1.87
LITAFQ99732 AP002907.1-201ENST00000606361 1430 ntBASIC3.36□□□□□ -1.87
LITAFQ99732 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LITAFQ99732 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
LITAFQ99732 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LITAFQ99732 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LITAFQ99732 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LITAFQ99732 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LITAFQ99732 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
LITAFQ99732 AC091046.3-201ENST00000631455 1574 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LITAFQ99732 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
LITAFQ99732 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC3.35□□□□□ -1.87
LITAFQ99732 OR4G2P-201ENST00000328113 903 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
LITAFQ99732 RNU6-249P-201ENST00000363016 102 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LITAFQ99732 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
LITAFQ99732 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.35□□□□□ -1.87
LITAFQ99732 RNU5A-6P-201ENST00000384136 116 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LITAFQ99732 RPS3AP23-201ENST00000401762 784 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 ZNF37CP-201ENST00000406795 241 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 MIR320C1-201ENST00000408566 88 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 Y_RNA.598-201ENST00000410480 95 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 AL133384.1-201ENST00000412744 351 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 HMGB3P23-201ENST00000414981 585 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 EIF4EP1-201ENST00000422311 642 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 AC099336.2-201ENST00000422457 254 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 OR8F1P-201ENST00000425243 930 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC3.35□□□□□ -1.87
LITAFQ99732 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.35□□□□□ -1.87
LITAFQ99732 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC3.35□□□□□ -1.87
LITAFQ99732 AL022324.2-201ENST00000434827 780 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC3.35□□□□□ -1.87
LITAFQ99732 RPL23AP16-201ENST00000441715 421 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 AC019185.1-201ENST00000442718 389 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.35□□□□□ -1.87
LITAFQ99732 AL450996.1-201ENST00000445574 1202 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.35□□□□□ -1.87
LITAFQ99732 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.35□□□□□ -1.87
LITAFQ99732 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC3.35□□□□□ -1.87
LITAFQ99732 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.35□□□□□ -1.87
LITAFQ99732 AC099560.2-201ENST00000457554 255 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC3.35□□□□□ -1.87
LITAFQ99732 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LITAFQ99732 MTND6P6-201ENST00000478031 263 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 SIAH1P1-201ENST00000479411 923 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 RPL7P24-201ENST00000493052 752 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 AC106872.3-201ENST00000495104 446 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.35□□□□□ -1.87
LITAFQ99732 Y_RNA.667-201ENST00000516212 107 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 RN7SKP244-201ENST00000516513 307 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 RNU6-506P-201ENST00000516553 94 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 AC104986.1-201ENST00000517978 436 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.35□□□□□ -1.87
LITAFQ99732 OR5M7P-201ENST00000526140 972 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 MED28P5-201ENST00000528254 438 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms