Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 MIR199A2-201ENST00000385289 110 ntBASIC3.56□□□□□ -1.84
COL21A1Q96P44 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.56□□□□□ -1.84
COL21A1Q96P44 RPL7P53-201ENST00000421245 739 ntBASIC3.56□□□□□ -1.84
COL21A1Q96P44 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
COL21A1Q96P44 AL451062.2-201ENST00000427515 271 ntBASIC3.56□□□□□ -1.84
COL21A1Q96P44 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
COL21A1Q96P44 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.56□□□□□ -1.84
COL21A1Q96P44 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.56□□□□□ -1.84
COL21A1Q96P44 MTND2P8-201ENST00000450555 1025 ntBASIC3.56□□□□□ -1.84
COL21A1Q96P44 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.56□□□□□ -1.84
COL21A1Q96P44 HMGB1P5-202ENST00000451497 985 ntBASIC3.56□□□□□ -1.84
COL21A1Q96P44 NANOGP10-201ENST00000453325 895 ntBASIC3.56□□□□□ -1.84
COL21A1Q96P44 RN7SL323P-201ENST00000494712 295 ntBASIC3.56□□□□□ -1.84
COL21A1Q96P44 AL139099.1-201ENST00000497398 403 ntBASIC3.56□□□□□ -1.84
COL21A1Q96P44 AC111193.1-201ENST00000504097 155 ntBASIC3.56□□□□□ -1.84
COL21A1Q96P44 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
COL21A1Q96P44 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
COL21A1Q96P44 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.56□□□□□ -1.84
COL21A1Q96P44 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.56□□□□□ -1.84
COL21A1Q96P44 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
COL21A1Q96P44 AP002812.4-201ENST00000532139 286 ntBASIC3.56□□□□□ -1.84
COL21A1Q96P44 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.56□□□□□ -1.84
COL21A1Q96P44 AC106785.3-201ENST00000564064 847 ntBASIC3.56□□□□□ -1.84
COL21A1Q96P44 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.56□□□□□ -1.84
COL21A1Q96P44 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.56□□□□□ -1.84
COL21A1Q96P44 AL137849.1-201ENST00000604767 169 ntBASIC3.56□□□□□ -1.84
COL21A1Q96P44 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.56□□□□□ -1.84
COL21A1Q96P44 AC099676.1-201ENST00000608886 657 ntBASIC3.56□□□□□ -1.84
COL21A1Q96P44 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.56□□□□□ -1.84
COL21A1Q96P44 AL354798.1-201ENST00000622505 329 ntBASIC3.56□□□□□ -1.84
COL21A1Q96P44 AC015726.3-201ENST00000624501 418 ntBASIC3.56□□□□□ -1.84
COL21A1Q96P44 CDRT1-208ENST00000630868 794 ntBASIC3.56□□□□□ -1.84
COL21A1Q96P44 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
COL21A1Q96P44 PRO1804-201ENST00000623780 2050 ntBASIC3.56□□□□□ -1.84
COL21A1Q96P44 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
COL21A1Q96P44 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
COL21A1Q96P44 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.55□□□□□ -1.84
COL21A1Q96P44 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
COL21A1Q96P44 AC022031.1-201ENST00000585985 2593 ntBASIC3.55□□□□□ -1.84
COL21A1Q96P44 AC083799.1-201ENST00000366451 910 ntBASIC3.55□□□□□ -1.84
COL21A1Q96P44 AC025750.1-201ENST00000399891 379 ntBASIC3.55□□□□□ -1.84
COL21A1Q96P44 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.55□□□□□ -1.84
COL21A1Q96P44 AL391417.1-201ENST00000404100 426 ntBASIC3.55□□□□□ -1.84
COL21A1Q96P44 Z86062.1-201ENST00000406773 777 ntBASIC3.55□□□□□ -1.84
COL21A1Q96P44 SNORA3.3-201ENST00000408712 125 ntBASIC3.55□□□□□ -1.84
COL21A1Q96P44 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.55□□□□□ -1.84
COL21A1Q96P44 AC009237.5-201ENST00000414271 501 ntBASIC3.55□□□□□ -1.84
COL21A1Q96P44 LINC01881-201ENST00000416103 412 ntBASIC3.55□□□□□ -1.84
COL21A1Q96P44 AL389915.1-201ENST00000422463 466 ntBASIC3.55□□□□□ -1.84
COL21A1Q96P44 AC002075.2-201ENST00000425207 252 ntBASIC3.55□□□□□ -1.84
COL21A1Q96P44 AL590623.1-201ENST00000427864 105 ntBASIC3.55□□□□□ -1.84
COL21A1Q96P44 AC006946.1-201ENST00000429106 328 ntBASIC3.55□□□□□ -1.84
COL21A1Q96P44 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.55□□□□□ -1.84
COL21A1Q96P44 RPS29P7-201ENST00000439662 171 ntBASIC3.55□□□□□ -1.84
COL21A1Q96P44 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.55□□□□□ -1.84
COL21A1Q96P44 RPL7L1P8-201ENST00000469911 741 ntBASIC3.55□□□□□ -1.84
COL21A1Q96P44 AC107398.1-201ENST00000486904 505 ntBASIC3.55□□□□□ -1.84
COL21A1Q96P44 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.55□□□□□ -1.84
COL21A1Q96P44 RNA5SP208-201ENST00000516156 78 ntBASIC3.55□□□□□ -1.84
COL21A1Q96P44 RNA5SP164-201ENST00000516533 110 ntBASIC3.55□□□□□ -1.84
COL21A1Q96P44 RN7SKP82-201ENST00000516786 223 ntBASIC3.55□□□□□ -1.84
COL21A1Q96P44 RN7SKP209-201ENST00000516888 304 ntBASIC3.55□□□□□ -1.84
COL21A1Q96P44 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.55□□□□□ -1.84
COL21A1Q96P44 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.55□□□□□ -1.84
COL21A1Q96P44 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.55□□□□□ -1.84
COL21A1Q96P44 HMGB1P46-201ENST00000520062 610 ntBASIC3.55□□□□□ -1.84
COL21A1Q96P44 OR4A2P-201ENST00000527276 913 ntBASIC3.55□□□□□ -1.84
COL21A1Q96P44 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.55□□□□□ -1.84
COL21A1Q96P44 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.55□□□□□ -1.84
COL21A1Q96P44 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.55□□□□□ -1.84
COL21A1Q96P44 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.55□□□□□ -1.84
COL21A1Q96P44 RN7SL703P-201ENST00000578485 302 ntBASIC3.55□□□□□ -1.84
COL21A1Q96P44 AC015849.2-201ENST00000605738 409 ntBASIC3.55□□□□□ -1.84
COL21A1Q96P44 RNVU1-4-201ENST00000612985 164 ntBASIC3.55□□□□□ -1.84
COL21A1Q96P44 AC000123.2-201ENST00000623124 461 ntBASIC3.55□□□□□ -1.84
COL21A1Q96P44 OR6C71P-202ENST00000641886 1107 ntBASIC3.55□□□□□ -1.84
COL21A1Q96P44 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
COL21A1Q96P44 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
COL21A1Q96P44 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.55□□□□□ -1.84
COL21A1Q96P44 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
COL21A1Q96P44 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.54□□□□□ -1.84
COL21A1Q96P44 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
COL21A1Q96P44 AL136964.1-201ENST00000622038 2990 ntBASIC3.54□□□□□ -1.84
COL21A1Q96P44 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.54□□□□□ -1.84
COL21A1Q96P44 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL21A1Q96P44 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.54□□□□□ -1.84
COL21A1Q96P44 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL21A1Q96P44 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL21A1Q96P44 AL122126.1-201ENST00000546905 1318 ntBASIC3.54□□□□□ -1.84
COL21A1Q96P44 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
COL21A1Q96P44 RNU1-64P-201ENST00000365443 163 ntBASIC3.54□□□□□ -1.84
COL21A1Q96P44 MIR134-201ENST00000385258 73 ntBASIC3.54□□□□□ -1.84
COL21A1Q96P44 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.54□□□□□ -1.84
COL21A1Q96P44 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
COL21A1Q96P44 Z74696.2-201ENST00000436514 498 ntBASIC3.54□□□□□ -1.84
COL21A1Q96P44 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.54□□□□□ -1.84
COL21A1Q96P44 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.54□□□□□ -1.84
COL21A1Q96P44 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.54□□□□□ -1.84
COL21A1Q96P44 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL21A1Q96P44 AC025459.1-201ENST00000504072 156 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms