Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 INTS6P1-201ENST00000504674 2530 ntBASIC4.91□□□□□ -1.62
RNF31Q96EP0 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
RNF31Q96EP0 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RNF31Q96EP0 AC107982.1-201ENST00000507171 1300 ntBASIC4.91□□□□□ -1.62
RNF31Q96EP0 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RNF31Q96EP0 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RNF31Q96EP0 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
RNF31Q96EP0 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.62
RNF31Q96EP0 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RNF31Q96EP0 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RNF31Q96EP0 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
RNF31Q96EP0 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.9□□□□□ -1.62
RNF31Q96EP0 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.62
RNF31Q96EP0 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
RNF31Q96EP0 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
RNF31Q96EP0 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.9□□□□□ -1.62
RNF31Q96EP0 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.9□□□□□ -1.62
RNF31Q96EP0 TEX21P-201ENST00000447107 1476 ntBASIC4.9□□□□□ -1.62
RNF31Q96EP0 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
RNF31Q96EP0 AC063976.2-201ENST00000425667 3556 ntBASIC4.9□□□□□ -1.62
RNF31Q96EP0 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
RNF31Q96EP0 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
RNF31Q96EP0 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RNF31Q96EP0 RNY4P24-201ENST00000362735 96 ntBASIC4.9□□□□□ -1.63
RNF31Q96EP0 RNA5SP443-201ENST00000363083 132 ntBASIC4.9□□□□□ -1.63
RNF31Q96EP0 RNU6-867P-201ENST00000364956 107 ntBASIC4.9□□□□□ -1.63
RNF31Q96EP0 UBBP2-201ENST00000376781 231 ntBASIC4.9□□□□□ -1.63
RNF31Q96EP0 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
RNF31Q96EP0 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
RNF31Q96EP0 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
RNF31Q96EP0 OR8G2P-201ENST00000412796 908 ntBASIC4.9□□□□□ -1.63
RNF31Q96EP0 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.9□□□□□ -1.63
RNF31Q96EP0 BOLA3P4-201ENST00000418151 400 ntBASIC4.9□□□□□ -1.63
RNF31Q96EP0 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.9□□□□□ -1.63
RNF31Q96EP0 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.9□□□□□ -1.63
RNF31Q96EP0 AL365184.2-201ENST00000431139 435 ntBASIC4.9□□□□□ -1.63
RNF31Q96EP0 AL513175.1-201ENST00000431492 780 ntBASIC4.9□□□□□ -1.63
RNF31Q96EP0 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.9□□□□□ -1.63
RNF31Q96EP0 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RNF31Q96EP0 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.9□□□□□ -1.63
RNF31Q96EP0 UBE2FP3-201ENST00000436366 524 ntBASIC4.9□□□□□ -1.63
RNF31Q96EP0 AL450263.2-201ENST00000439400 589 ntBASIC4.9□□□□□ -1.63
RNF31Q96EP0 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.9□□□□□ -1.63
RNF31Q96EP0 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.9□□□□□ -1.63
RNF31Q96EP0 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.9□□□□□ -1.63
RNF31Q96EP0 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.9□□□□□ -1.63
RNF31Q96EP0 RPL10P17-201ENST00000453852 316 ntBASIC4.9□□□□□ -1.63
RNF31Q96EP0 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.9□□□□□ -1.63
RNF31Q96EP0 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.9□□□□□ -1.63
RNF31Q96EP0 AC007686.1-201ENST00000488511 463 ntBASIC4.9□□□□□ -1.63
RNF31Q96EP0 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.9□□□□□ -1.63
RNF31Q96EP0 AC108078.3-201ENST00000502633 489 ntBASIC4.9□□□□□ -1.63
RNF31Q96EP0 AC138853.1-201ENST00000503549 823 ntBASIC4.9□□□□□ -1.63
RNF31Q96EP0 MYL12BP2-201ENST00000503948 512 ntBASIC4.9□□□□□ -1.63
RNF31Q96EP0 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.9□□□□□ -1.63
RNF31Q96EP0 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RNF31Q96EP0 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.9□□□□□ -1.63
RNF31Q96EP0 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.9□□□□□ -1.63
RNF31Q96EP0 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.9□□□□□ -1.63
RNF31Q96EP0 AC092709.1-201ENST00000521355 1045 ntBASIC4.9□□□□□ -1.63
RNF31Q96EP0 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.9□□□□□ -1.63
RNF31Q96EP0 AC084757.1-201ENST00000559987 490 ntBASIC4.9□□□□□ -1.63
RNF31Q96EP0 MTCYBP13-201ENST00000578634 1093 ntBASIC4.9□□□□□ -1.63
RNF31Q96EP0 AC127024.5-201ENST00000580085 462 ntBASIC4.9□□□□□ -1.63
RNF31Q96EP0 KPNA2P3-201ENST00000584190 848 ntBASIC4.9□□□□□ -1.63
RNF31Q96EP0 MIR7853-201ENST00000584820 132 ntBASIC4.9□□□□□ -1.63
RNF31Q96EP0 MIR548AB-201ENST00000584917 84 ntBASIC4.9□□□□□ -1.63
RNF31Q96EP0 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.9□□□□□ -1.63
RNF31Q96EP0 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.9□□□□□ -1.63
RNF31Q96EP0 AC011626.1-201ENST00000604710 562 ntBASIC4.9□□□□□ -1.63
RNF31Q96EP0 AC243756.2-201ENST00000618406 463 ntBASIC4.9□□□□□ -1.63
RNF31Q96EP0 AP000648.2-201ENST00000624182 404 ntBASIC4.9□□□□□ -1.63
RNF31Q96EP0 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.9□□□□□ -1.63
RNF31Q96EP0 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
RNF31Q96EP0 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
RNF31Q96EP0 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
RNF31Q96EP0 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
RNF31Q96EP0 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
RNF31Q96EP0 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.9□□□□□ -1.63
RNF31Q96EP0 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.9□□□□□ -1.63
RNF31Q96EP0 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RNF31Q96EP0 ASNSP1-204ENST00000641977 1664 ntBASIC4.89□□□□□ -1.63
RNF31Q96EP0 AC135352.1-201ENST00000506173 1418 ntBASIC4.89□□□□□ -1.63
RNF31Q96EP0 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF31Q96EP0 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF31Q96EP0 AC000374.1-201ENST00000434698 1745 ntBASIC4.89□□□□□ -1.63
RNF31Q96EP0 CDR1-202ENST00000625883 1485 ntBASIC4.89□□□□□ -1.63
RNF31Q96EP0 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RNF31Q96EP0 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.89□□□□□ -1.63
RNF31Q96EP0 AP000542.2-201ENST00000623199 6179 ntBASIC4.89□□□□□ -1.63
RNF31Q96EP0 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF31Q96EP0 MTCO1P23-201ENST00000415223 1526 ntBASIC4.89□□□□□ -1.63
RNF31Q96EP0 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
RNF31Q96EP0 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF31Q96EP0 RNA5SP428-201ENST00000365129 132 ntBASIC4.89□□□□□ -1.63
RNF31Q96EP0 RNA5SP88-201ENST00000365560 109 ntBASIC4.89□□□□□ -1.63
RNF31Q96EP0 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.89□□□□□ -1.63
RNF31Q96EP0 AL133270.1-201ENST00000402635 279 ntBASIC4.89□□□□□ -1.63
RNF31Q96EP0 NCSTNP1-201ENST00000406229 144 ntBASIC4.89□□□□□ -1.63
RNF31Q96EP0 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms