Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RFT1Q96AA3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
RFT1Q96AA3 MTND5P31-201ENST00000419366 1374 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RFT1Q96AA3 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RFT1Q96AA3 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.84□□□□□ -1.79
RFT1Q96AA3 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 DBF4P1-201ENST00000412976 1892 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
RFT1Q96AA3 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
RFT1Q96AA3 SNORA70E-201ENST00000384492 135 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 RNU6-925P-201ENST00000384629 104 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 MIR659-201ENST00000384963 97 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.84□□□□□ -1.79
RFT1Q96AA3 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.84□□□□□ -1.79
RFT1Q96AA3 AL109941.1-201ENST00000401925 229 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 AL139098.1-201ENST00000407291 389 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
RFT1Q96AA3 RN7SKP106-201ENST00000410832 272 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 RPL23AP26-201ENST00000412728 464 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 MTND4P3-201ENST00000417829 541 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 RAD23BP1-201ENST00000421404 1227 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 AL627308.1-201ENST00000435693 821 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC3.84□□□□□ -1.79
RFT1Q96AA3 AC012671.1-201ENST00000451912 203 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 MRPL42P4-201ENST00000453267 443 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 HMGN3P1-201ENST00000453847 193 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 RPS3AP53-201ENST00000454716 778 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.84□□□□□ -1.79
RFT1Q96AA3 SNORD108-201ENST00000459332 71 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 RPS3AP41-201ENST00000462701 778 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.84□□□□□ -1.79
RFT1Q96AA3 AC025554.1-201ENST00000505641 188 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 AC025674.1-201ENST00000507074 324 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 AC010460.2-201ENST00000509054 677 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.84□□□□□ -1.79
RFT1Q96AA3 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
RFT1Q96AA3 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.84□□□□□ -1.79
RFT1Q96AA3 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC3.84□□□□□ -1.79
RFT1Q96AA3 UBE2Q2P10-201ENST00000514854 900 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.84□□□□□ -1.79
RFT1Q96AA3 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC3.84□□□□□ -1.79
RFT1Q96AA3 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.84□□□□□ -1.79
RFT1Q96AA3 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RFT1Q96AA3 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
RFT1Q96AA3 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RFT1Q96AA3 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.84□□□□□ -1.79
RFT1Q96AA3 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.84□□□□□ -1.79
RFT1Q96AA3 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.84□□□□□ -1.79
RFT1Q96AA3 AC044913.1-201ENST00000557200 430 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.84□□□□□ -1.79
RFT1Q96AA3 MTND1P8-201ENST00000571424 950 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RFT1Q96AA3 MIR4436B2-201ENST00000581415 91 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 MIR4436B1-201ENST00000583272 91 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 AC005255.1-201ENST00000593748 216 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 AC020914.4-201ENST00000597690 277 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 IGKV1OR2-9-201ENST00000603957 287 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 IGKV1OR2-11-201ENST00000604120 287 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 AL049634.3-201ENST00000604968 457 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 AC023043.4-201ENST00000612081 449 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RFT1Q96AA3 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.84□□□□□ -1.79
RFT1Q96AA3 AC018445.2-201ENST00000622987 260 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 AC019278.1-201ENST00000623516 479 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 AC006065.6-201ENST00000625201 545 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 CCT5-215ENST00000625723 135 ntTSL 5 BASIC3.84□□□□□ -1.79
RFT1Q96AA3 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC3.84□□□□□ -1.79
RFT1Q96AA3 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC3.84□□□□□ -1.79
RFT1Q96AA3 AC068620.4-201ENST00000636730 1182 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
RFT1Q96AA3 AL122126.1-201ENST00000546905 1318 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 ELL2P4-201ENST00000446870 1376 ntBASIC3.84□□□□□ -1.79
RFT1Q96AA3 AC027287.1-201ENST00000553115 1453 ntBASIC3.84□□□□□ -1.8
RFT1Q96AA3 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
RFT1Q96AA3 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
RFT1Q96AA3 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RFT1Q96AA3 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RFT1Q96AA3 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.83□□□□□ -1.8
RFT1Q96AA3 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
RFT1Q96AA3 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RFT1Q96AA3 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RFT1Q96AA3 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RFT1Q96AA3 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
RFT1Q96AA3 SNORD116-23-201ENST00000384645 92 ntBASIC3.83□□□□□ -1.8
RFT1Q96AA3 MIR217-201ENST00000384817 110 ntBASIC3.83□□□□□ -1.8
RFT1Q96AA3 AL079342.2-201ENST00000403367 482 ntBASIC3.83□□□□□ -1.8
RFT1Q96AA3 RN7SKP278-201ENST00000410504 342 ntBASIC3.83□□□□□ -1.8
RFT1Q96AA3 MIR1911-201ENST00000410783 80 ntBASIC3.83□□□□□ -1.8
RFT1Q96AA3 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.83□□□□□ -1.8
RFT1Q96AA3 RPL31P2-201ENST00000413849 377 ntBASIC3.83□□□□□ -1.8
RFT1Q96AA3 SNRPFP1-201ENST00000414761 252 ntBASIC3.83□□□□□ -1.8
RFT1Q96AA3 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.83□□□□□ -1.8
RFT1Q96AA3 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.83□□□□□ -1.8
RFT1Q96AA3 C1DP1-201ENST00000426049 402 ntBASIC3.83□□□□□ -1.8
RFT1Q96AA3 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.83□□□□□ -1.8
RFT1Q96AA3 B3GNT2P1-201ENST00000434960 952 ntBASIC3.83□□□□□ -1.8
RFT1Q96AA3 USP9YP7-201ENST00000436723 430 ntBASIC3.83□□□□□ -1.8
RFT1Q96AA3 CEACAMP6-201ENST00000452007 574 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms