Protein–RNA interactions for Protein: Q8WUD4

CCDC12, Coiled-coil domain-containing protein 12, humanhuman

Predicted RBP Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12Q8WUD4 AC100871.1-201ENST00000507871 1456 ntBASIC4.1□□□□□ -1.75
CCDC12Q8WUD4 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC12Q8WUD4 AC073073.2-201ENST00000609827 2578 ntBASIC4.09□□□□□ -1.75
CCDC12Q8WUD4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC12Q8WUD4 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC12Q8WUD4 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC12Q8WUD4 AC007656.2-201ENST00000624902 4547 ntBASIC4.09□□□□□ -1.75
CCDC12Q8WUD4 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC12Q8WUD4 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC12Q8WUD4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
CCDC12Q8WUD4 RNU6-283P-201ENST00000364788 107 ntBASIC4.09□□□□□ -1.75
CCDC12Q8WUD4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CCDC12Q8WUD4 RPL7P53-201ENST00000421245 739 ntBASIC4.09□□□□□ -1.75
CCDC12Q8WUD4 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC12Q8WUD4 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC12Q8WUD4 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC12Q8WUD4 RPL21P71-201ENST00000465598 459 ntBASIC4.09□□□□□ -1.75
CCDC12Q8WUD4 AP002812.1-201ENST00000495378 474 ntBASIC4.09□□□□□ -1.75
CCDC12Q8WUD4 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC12Q8WUD4 OR5AP1P-201ENST00000529730 940 ntBASIC4.09□□□□□ -1.75
CCDC12Q8WUD4 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.09□□□□□ -1.75
CCDC12Q8WUD4 CBX3P5-201ENST00000552017 521 ntBASIC4.09□□□□□ -1.75
CCDC12Q8WUD4 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.09□□□□□ -1.75
CCDC12Q8WUD4 VN1R79P-201ENST00000593540 513 ntBASIC4.09□□□□□ -1.75
CCDC12Q8WUD4 AC245389.1-201ENST00000605141 529 ntBASIC4.09□□□□□ -1.75
CCDC12Q8WUD4 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC12Q8WUD4 AL592295.2-201ENST00000612578 206 ntBASIC4.09□□□□□ -1.75
CCDC12Q8WUD4 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
CCDC12Q8WUD4 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CCDC12Q8WUD4 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CCDC12Q8WUD4 PRO1804-201ENST00000623780 2050 ntBASIC4.09□□□□□ -1.76
CCDC12Q8WUD4 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC12Q8WUD4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC12Q8WUD4 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC12Q8WUD4 RNU1-87P-201ENST00000363727 170 ntBASIC4.08□□□□□ -1.76
CCDC12Q8WUD4 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC12Q8WUD4 MIR184-201ENST00000384962 84 ntBASIC4.08□□□□□ -1.76
CCDC12Q8WUD4 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC12Q8WUD4 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.08□□□□□ -1.76
CCDC12Q8WUD4 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC12Q8WUD4 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC12Q8WUD4 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC12Q8WUD4 OSTCP5-201ENST00000425293 453 ntBASIC4.08□□□□□ -1.76
CCDC12Q8WUD4 HSPD1P21-201ENST00000436541 245 ntBASIC4.08□□□□□ -1.76
CCDC12Q8WUD4 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC12Q8WUD4 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC12Q8WUD4 NMD3P1-201ENST00000439704 1488 ntBASIC4.08□□□□□ -1.76
CCDC12Q8WUD4 EIF2S2P4-201ENST00000461070 984 ntBASIC4.08□□□□□ -1.76
CCDC12Q8WUD4 AC113398.2-201ENST00000507630 558 ntBASIC4.08□□□□□ -1.76
CCDC12Q8WUD4 AC103843.2-201ENST00000530523 682 ntBASIC4.08□□□□□ -1.76
CCDC12Q8WUD4 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC12Q8WUD4 MIR3158-1-201ENST00000583596 81 ntBASIC4.08□□□□□ -1.76
CCDC12Q8WUD4 SNORA51-201ENST00000606420 132 ntBASIC4.08□□□□□ -1.76
CCDC12Q8WUD4 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.08□□□□□ -1.76
CCDC12Q8WUD4 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC12Q8WUD4 MFSD8-236ENST00000641509 4050 ntBASIC4.08□□□□□ -1.76
CCDC12Q8WUD4 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC12Q8WUD4 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC12Q8WUD4 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CCDC12Q8WUD4 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC12Q8WUD4 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC12Q8WUD4 AC095050.2-201ENST00000510748 1458 ntBASIC4.07□□□□□ -1.76
CCDC12Q8WUD4 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC12Q8WUD4 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC12Q8WUD4 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.07□□□□□ -1.76
CCDC12Q8WUD4 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CCDC12Q8WUD4 RN7SKP53-201ENST00000411337 315 ntBASIC4.07□□□□□ -1.76
CCDC12Q8WUD4 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC12Q8WUD4 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC12Q8WUD4 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC12Q8WUD4 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC12Q8WUD4 RPS15AP29-201ENST00000445539 400 ntBASIC4.07□□□□□ -1.76
CCDC12Q8WUD4 SNRPGP5-201ENST00000456003 220 ntBASIC4.07□□□□□ -1.76
CCDC12Q8WUD4 SNORA84-201ENST00000459229 133 ntBASIC4.07□□□□□ -1.76
CCDC12Q8WUD4 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.07□□□□□ -1.76
CCDC12Q8WUD4 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC12Q8WUD4 AC106872.2-201ENST00000494303 480 ntBASIC4.07□□□□□ -1.76
CCDC12Q8WUD4 AC092045.1-201ENST00000495716 1231 ntBASIC4.07□□□□□ -1.76
CCDC12Q8WUD4 HMGN1P15-201ENST00000513870 295 ntBASIC4.07□□□□□ -1.76
CCDC12Q8WUD4 AC022790.1-201ENST00000522872 204 ntBASIC4.07□□□□□ -1.76
CCDC12Q8WUD4 IGKV2D-19-201ENST00000523346 262 ntBASIC4.07□□□□□ -1.76
CCDC12Q8WUD4 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC12Q8WUD4 AC010680.4-201ENST00000605334 543 ntBASIC4.07□□□□□ -1.76
CCDC12Q8WUD4 AC006133.1-201ENST00000617106 264 ntBASIC4.07□□□□□ -1.76
CCDC12Q8WUD4 uc_338.9-201ENST00000617424 182 ntBASIC4.07□□□□□ -1.76
CCDC12Q8WUD4 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC12Q8WUD4 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC12Q8WUD4 AL365440.1-201ENST00000436135 2167 ntBASIC4.07□□□□□ -1.76
CCDC12Q8WUD4 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.07□□□□□ -1.76
CCDC12Q8WUD4 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC12Q8WUD4 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC12Q8WUD4 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC12Q8WUD4 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC12Q8WUD4 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC12Q8WUD4 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC12Q8WUD4 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC12Q8WUD4 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC12Q8WUD4 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC12Q8WUD4 U3.15-201ENST00000365398 212 ntBASIC4.06□□□□□ -1.76
CCDC12Q8WUD4 RNA5SP235-201ENST00000365411 114 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms