Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC2.71□□□□□ -1.98
NUP35Q8NFH5 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
NUP35Q8NFH5 IGKV7-3-201ENST00000357453 298 ntBASIC2.71□□□□□ -1.98
NUP35Q8NFH5 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
NUP35Q8NFH5 RNU6-244P-201ENST00000391028 104 ntBASIC2.71□□□□□ -1.98
NUP35Q8NFH5 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.71□□□□□ -1.98
NUP35Q8NFH5 AC068533.1-201ENST00000418542 415 ntBASIC2.71□□□□□ -1.98
NUP35Q8NFH5 AC245291.1-201ENST00000419501 328 ntBASIC2.71□□□□□ -1.98
NUP35Q8NFH5 GTF2IP23-201ENST00000423746 351 ntBASIC2.71□□□□□ -1.98
NUP35Q8NFH5 MRPL50P1-201ENST00000431951 384 ntBASIC2.71□□□□□ -1.98
NUP35Q8NFH5 HMGB1P12-201ENST00000438594 598 ntBASIC2.71□□□□□ -1.98
NUP35Q8NFH5 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
NUP35Q8NFH5 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
NUP35Q8NFH5 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC2.71□□□□□ -1.98
NUP35Q8NFH5 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC2.71□□□□□ -1.98
NUP35Q8NFH5 AC146507.1-201ENST00000468335 354 ntBASIC2.71□□□□□ -1.98
NUP35Q8NFH5 RPL31P13-201ENST00000484151 370 ntBASIC2.71□□□□□ -1.98
NUP35Q8NFH5 RPL23AP55-201ENST00000498163 452 ntBASIC2.71□□□□□ -1.98
NUP35Q8NFH5 RPS27AP13-201ENST00000498403 237 ntBASIC2.71□□□□□ -1.98
NUP35Q8NFH5 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC2.71□□□□□ -1.98
NUP35Q8NFH5 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC2.71□□□□□ -1.98
NUP35Q8NFH5 RNU2-27P-201ENST00000516185 142 ntBASIC2.71□□□□□ -1.98
NUP35Q8NFH5 RNA5SP164-201ENST00000516533 110 ntBASIC2.71□□□□□ -1.98
NUP35Q8NFH5 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC2.71□□□□□ -1.98
NUP35Q8NFH5 AC022695.1-201ENST00000522089 237 ntBASIC2.71□□□□□ -1.98
NUP35Q8NFH5 AL163153.1-201ENST00000554223 283 ntBASIC2.71□□□□□ -1.98
NUP35Q8NFH5 PSMB7P1-201ENST00000556349 514 ntBASIC2.71□□□□□ -1.98
NUP35Q8NFH5 AC027281.1-201ENST00000574178 758 ntBASIC2.71□□□□□ -1.98
NUP35Q8NFH5 AP005901.4-201ENST00000577336 569 ntBASIC2.71□□□□□ -1.98
NUP35Q8NFH5 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC2.71□□□□□ -1.98
NUP35Q8NFH5 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC2.71□□□□□ -1.98
NUP35Q8NFH5 PCNAP1-202ENST00000595299 752 ntBASIC2.71□□□□□ -1.98
NUP35Q8NFH5 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
NUP35Q8NFH5 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.71□□□□□ -1.98
NUP35Q8NFH5 AC009948.4-201ENST00000604692 675 ntBASIC2.71□□□□□ -1.98
NUP35Q8NFH5 AL356218.2-201ENST00000605264 187 ntBASIC2.71□□□□□ -1.98
NUP35Q8NFH5 HMGN2P28-201ENST00000606102 262 ntBASIC2.71□□□□□ -1.98
NUP35Q8NFH5 AC107294.3-201ENST00000609211 526 ntBASIC2.71□□□□□ -1.98
NUP35Q8NFH5 AP000346.3-201ENST00000622821 210 ntBASIC2.71□□□□□ -1.98
NUP35Q8NFH5 AC110801.1-201ENST00000623590 212 ntBASIC2.71□□□□□ -1.98
NUP35Q8NFH5 AC073342.3-201ENST00000624211 193 ntBASIC2.71□□□□□ -1.98
NUP35Q8NFH5 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.71□□□□□ -1.98
NUP35Q8NFH5 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
NUP35Q8NFH5 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC2.71□□□□□ -1.98
NUP35Q8NFH5 LARP1BP1-201ENST00000506036 1359 ntBASIC2.71□□□□□ -1.98
NUP35Q8NFH5 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.71□□□□□ -1.98
NUP35Q8NFH5 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
NUP35Q8NFH5 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NUP35Q8NFH5 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
NUP35Q8NFH5 AC139713.2-214ENST00000642059 1811 ntBASIC2.7□□□□□ -1.98
NUP35Q8NFH5 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC2.7□□□□□ -1.98
NUP35Q8NFH5 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
NUP35Q8NFH5 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
NUP35Q8NFH5 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.7□□□□□ -1.98
NUP35Q8NFH5 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
NUP35Q8NFH5 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.7□□□□□ -1.98
NUP35Q8NFH5 MIR383-201ENST00000362257 73 ntBASIC2.7□□□□□ -1.98
NUP35Q8NFH5 RNA5SP509-201ENST00000364577 119 ntBASIC2.7□□□□□ -1.98
NUP35Q8NFH5 RNA5SP97-201ENST00000365006 84 ntBASIC2.7□□□□□ -1.98
NUP35Q8NFH5 RNA5SP366-201ENST00000365454 123 ntBASIC2.7□□□□□ -1.98
NUP35Q8NFH5 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
NUP35Q8NFH5 RN7SKP33-201ENST00000410942 340 ntBASIC2.7□□□□□ -1.98
NUP35Q8NFH5 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC2.7□□□□□ -1.98
NUP35Q8NFH5 RANP4-201ENST00000413361 655 ntBASIC2.7□□□□□ -1.98
NUP35Q8NFH5 RPL31P2-201ENST00000413849 377 ntBASIC2.7□□□□□ -1.98
NUP35Q8NFH5 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC2.7□□□□□ -1.98
NUP35Q8NFH5 AC245028.1-201ENST00000423259 256 ntBASIC2.7□□□□□ -1.98
NUP35Q8NFH5 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC2.7□□□□□ -1.98
NUP35Q8NFH5 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.7□□□□□ -1.98
NUP35Q8NFH5 AL691449.1-201ENST00000426570 421 ntBASIC2.7□□□□□ -1.98
NUP35Q8NFH5 AP000907.1-201ENST00000428428 510 ntBASIC2.7□□□□□ -1.98
NUP35Q8NFH5 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NUP35Q8NFH5 RPL23AP22-201ENST00000437556 453 ntBASIC2.7□□□□□ -1.98
NUP35Q8NFH5 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC2.7□□□□□ -1.98
NUP35Q8NFH5 CBX1P1-201ENST00000440184 427 ntBASIC2.7□□□□□ -1.98
NUP35Q8NFH5 RPL7P59-201ENST00000447700 943 ntBASIC2.7□□□□□ -1.98
NUP35Q8NFH5 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.7□□□□□ -1.98
NUP35Q8NFH5 RPL29P29-201ENST00000448725 423 ntBASIC2.7□□□□□ -1.98
NUP35Q8NFH5 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.7□□□□□ -1.98
NUP35Q8NFH5 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC2.7□□□□□ -1.98
NUP35Q8NFH5 RPL31P53-201ENST00000457065 348 ntBASIC2.7□□□□□ -1.98
NUP35Q8NFH5 HMGN1P18-201ENST00000457642 277 ntBASIC2.7□□□□□ -1.98
NUP35Q8NFH5 AC011276.1-201ENST00000469688 323 ntBASIC2.7□□□□□ -1.98
NUP35Q8NFH5 RN7SL303P-201ENST00000469773 251 ntBASIC2.7□□□□□ -1.98
NUP35Q8NFH5 AC021205.2-201ENST00000480069 347 ntBASIC2.7□□□□□ -1.98
NUP35Q8NFH5 AC092185.1-201ENST00000491371 97 ntBASIC2.7□□□□□ -1.98
NUP35Q8NFH5 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC2.7□□□□□ -1.98
NUP35Q8NFH5 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
NUP35Q8NFH5 AC090071.1-201ENST00000507713 644 ntBASIC2.7□□□□□ -1.98
NUP35Q8NFH5 AC010265.1-201ENST00000513509 211 ntBASIC2.7□□□□□ -1.98
NUP35Q8NFH5 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC2.7□□□□□ -1.98
NUP35Q8NFH5 SNORA64.4-201ENST00000516632 81 ntBASIC2.7□□□□□ -1.98
NUP35Q8NFH5 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC2.7□□□□□ -1.98
NUP35Q8NFH5 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC2.7□□□□□ -1.98
NUP35Q8NFH5 AC138701.1-201ENST00000524329 714 ntBASIC2.7□□□□□ -1.98
NUP35Q8NFH5 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC2.7□□□□□ -1.98
NUP35Q8NFH5 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.7□□□□□ -1.98
NUP35Q8NFH5 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
NUP35Q8NFH5 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NUP35Q8NFH5 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms