Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 RNU1-68P-201ENST00000615382 146 ntBASIC5.06□□□□□ -1.6
VPS8Q8N3P4 AL122125.1-201ENST00000616999 600 ntBASIC5.06□□□□□ -1.6
VPS8Q8N3P4 U1.39-201ENST00000621562 146 ntBASIC5.06□□□□□ -1.6
VPS8Q8N3P4 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
VPS8Q8N3P4 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VPS8Q8N3P4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS8Q8N3P4 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VPS8Q8N3P4 ZNF833P-201ENST00000424938 1494 ntBASIC5.06□□□□□ -1.6
VPS8Q8N3P4 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.06□□□□□ -1.6
VPS8Q8N3P4 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS8Q8N3P4 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
VPS8Q8N3P4 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS8Q8N3P4 AL034403.1-201ENST00000399414 885 ntBASIC5.06□□□□□ -1.6
VPS8Q8N3P4 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS8Q8N3P4 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS8Q8N3P4 RSL24D1P3-201ENST00000449255 495 ntBASIC5.06□□□□□ -1.6
VPS8Q8N3P4 AL591363.1-201ENST00000450091 483 ntBASIC5.06□□□□□ -1.6
VPS8Q8N3P4 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS8Q8N3P4 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS8Q8N3P4 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS8Q8N3P4 RNU4ATAC3P-201ENST00000516699 126 ntBASIC5.06□□□□□ -1.6
VPS8Q8N3P4 NDUFB9P3-201ENST00000521269 501 ntBASIC5.06□□□□□ -1.6
VPS8Q8N3P4 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS8Q8N3P4 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.06□□□□□ -1.6
VPS8Q8N3P4 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS8Q8N3P4 MIR4325-201ENST00000583049 90 ntBASIC5.06□□□□□ -1.6
VPS8Q8N3P4 uc_338.1-201ENST00000612113 180 ntBASIC5.06□□□□□ -1.6
VPS8Q8N3P4 AC138932.5-201ENST00000617759 563 ntBASIC5.06□□□□□ -1.6
VPS8Q8N3P4 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS8Q8N3P4 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS8Q8N3P4 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS8Q8N3P4 NAMPTP1-201ENST00000440465 2514 ntBASIC5.05□□□□□ -1.6
VPS8Q8N3P4 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
VPS8Q8N3P4 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC5.05□□□□□ -1.6
VPS8Q8N3P4 RNA5-8SP4-201ENST00000365096 150 ntBASIC5.05□□□□□ -1.6
VPS8Q8N3P4 AC127526.1-201ENST00000417526 366 ntBASIC5.05□□□□□ -1.6
VPS8Q8N3P4 RPL23AP69-201ENST00000431134 458 ntBASIC5.05□□□□□ -1.6
VPS8Q8N3P4 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS8Q8N3P4 AP000936.3-201ENST00000438127 255 ntBASIC5.05□□□□□ -1.6
VPS8Q8N3P4 ELOCP23-201ENST00000452014 332 ntBASIC5.05□□□□□ -1.6
VPS8Q8N3P4 AC087312.1-201ENST00000471411 480 ntBASIC5.05□□□□□ -1.6
VPS8Q8N3P4 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS8Q8N3P4 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS8Q8N3P4 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS8Q8N3P4 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS8Q8N3P4 AC006539.2-201ENST00000601729 572 ntBASIC5.05□□□□□ -1.6
VPS8Q8N3P4 RPS4XP5-202ENST00000449995 1334 ntBASIC5.05□□□□□ -1.6
VPS8Q8N3P4 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS8Q8N3P4 AC118273.1-201ENST00000525324 3006 ntBASIC5.04□□□□□ -1.6
VPS8Q8N3P4 MIR184-201ENST00000384962 84 ntBASIC5.04□□□□□ -1.6
VPS8Q8N3P4 Z92545.1-201ENST00000411782 234 ntBASIC5.04□□□□□ -1.6
VPS8Q8N3P4 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS8Q8N3P4 AC069540.1-201ENST00000446320 988 ntBASIC5.04□□□□□ -1.6
VPS8Q8N3P4 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC5.04□□□□□ -1.6
VPS8Q8N3P4 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS8Q8N3P4 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.04□□□□□ -1.6
VPS8Q8N3P4 AL365503.1-201ENST00000605247 905 ntBASIC5.04□□□□□ -1.6
VPS8Q8N3P4 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS8Q8N3P4 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VPS8Q8N3P4 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS8Q8N3P4 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
VPS8Q8N3P4 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
VPS8Q8N3P4 BX890604.2-201ENST00000427883 474 ntBASIC5.03□□□□□ -1.6
VPS8Q8N3P4 HMGB3P11-201ENST00000440127 604 ntBASIC5.03□□□□□ -1.6
VPS8Q8N3P4 SUMO2P4-201ENST00000504193 276 ntBASIC5.03□□□□□ -1.6
VPS8Q8N3P4 RN7SKP60-201ENST00000516985 239 ntBASIC5.03□□□□□ -1.6
VPS8Q8N3P4 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.03□□□□□ -1.6
VPS8Q8N3P4 AC004024.1-201ENST00000549244 247 ntBASIC5.03□□□□□ -1.6
VPS8Q8N3P4 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS8Q8N3P4 AL365400.2-201ENST00000605604 902 ntBASIC5.03□□□□□ -1.6
VPS8Q8N3P4 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS8Q8N3P4 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.03□□□□□ -1.6
VPS8Q8N3P4 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
VPS8Q8N3P4 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
VPS8Q8N3P4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS8Q8N3P4 CRP-203ENST00000368111 512 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS8Q8N3P4 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS8Q8N3P4 OR6K4P-201ENST00000423179 955 ntBASIC5.02□□□□□ -1.61
VPS8Q8N3P4 CST9LP2-201ENST00000437612 320 ntBASIC5.02□□□□□ -1.61
VPS8Q8N3P4 ISCA1P2-201ENST00000438679 421 ntBASIC5.02□□□□□ -1.61
VPS8Q8N3P4 AC127537.2-201ENST00000439258 465 ntBASIC5.02□□□□□ -1.61
VPS8Q8N3P4 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS8Q8N3P4 FGF7P3-201ENST00000454645 303 ntBASIC5.02□□□□□ -1.61
VPS8Q8N3P4 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS8Q8N3P4 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS8Q8N3P4 OR4A2P-201ENST00000527276 913 ntBASIC5.02□□□□□ -1.61
VPS8Q8N3P4 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC5.02□□□□□ -1.61
VPS8Q8N3P4 AC087888.1-201ENST00000550884 1254 ntBASIC5.02□□□□□ -1.61
VPS8Q8N3P4 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS8Q8N3P4 AC018816.2-201ENST00000621460 353 ntBASIC5.02□□□□□ -1.61
VPS8Q8N3P4 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS8Q8N3P4 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VPS8Q8N3P4 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS8Q8N3P4 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.01□□□□□ -1.61
VPS8Q8N3P4 SNORA38.1-201ENST00000364172 131 ntBASIC5.01□□□□□ -1.61
VPS8Q8N3P4 AC096664.2-201ENST00000411843 406 ntBASIC5.01□□□□□ -1.61
VPS8Q8N3P4 AL445213.1-201ENST00000412589 747 ntBASIC5.01□□□□□ -1.61
VPS8Q8N3P4 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.01□□□□□ -1.61
VPS8Q8N3P4 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.01□□□□□ -1.61
VPS8Q8N3P4 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms