Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 MIR6867-201ENST00000610636 67 ntBASIC5.5□□□□□ -1.53
SYNE4Q8N205 AC087241.4-201ENST00000612441 480 ntBASIC5.5□□□□□ -1.53
SYNE4Q8N205 AC107075.1-201ENST00000613695 314 ntBASIC5.5□□□□□ -1.53
SYNE4Q8N205 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
SYNE4Q8N205 AF246928.1-201ENST00000623768 87 ntBASIC5.5□□□□□ -1.53
SYNE4Q8N205 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.5□□□□□ -1.53
SYNE4Q8N205 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SYNE4Q8N205 AC111188.2-201ENST00000529697 1387 ntBASIC5.5□□□□□ -1.53
SYNE4Q8N205 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SYNE4Q8N205 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SYNE4Q8N205 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.5□□□□□ -1.53
SYNE4Q8N205 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SYNE4Q8N205 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SYNE4Q8N205 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.5□□□□□ -1.53
SYNE4Q8N205 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.49□□□□□ -1.53
SYNE4Q8N205 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SYNE4Q8N205 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
SYNE4Q8N205 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SYNE4Q8N205 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC5.49□□□□□ -1.53
SYNE4Q8N205 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SYNE4Q8N205 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.49□□□□□ -1.53
SYNE4Q8N205 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.49□□□□□ -1.53
SYNE4Q8N205 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.49□□□□□ -1.53
SYNE4Q8N205 RNU6-157P-201ENST00000383957 107 ntBASIC5.49□□□□□ -1.53
SYNE4Q8N205 RNU6-1263P-201ENST00000384601 106 ntBASIC5.49□□□□□ -1.53
SYNE4Q8N205 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SYNE4Q8N205 RNU6-244P-201ENST00000391028 104 ntBASIC5.49□□□□□ -1.53
SYNE4Q8N205 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.49□□□□□ -1.53
SYNE4Q8N205 EIF4A1P3-201ENST00000411521 244 ntBASIC5.49□□□□□ -1.53
SYNE4Q8N205 RPS20P14-201ENST00000412545 360 ntBASIC5.49□□□□□ -1.53
SYNE4Q8N205 ELOCP17-201ENST00000414751 326 ntBASIC5.49□□□□□ -1.53
SYNE4Q8N205 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
SYNE4Q8N205 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.49□□□□□ -1.53
SYNE4Q8N205 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.49□□□□□ -1.53
SYNE4Q8N205 AC246680.2-201ENST00000422106 389 ntBASIC5.49□□□□□ -1.53
SYNE4Q8N205 AC244035.1-201ENST00000430042 390 ntBASIC5.49□□□□□ -1.53
SYNE4Q8N205 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC5.49□□□□□ -1.53
SYNE4Q8N205 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.49□□□□□ -1.53
SYNE4Q8N205 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SYNE4Q8N205 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.49□□□□□ -1.53
SYNE4Q8N205 OR51B8P-201ENST00000449892 769 ntBASIC5.49□□□□□ -1.53
SYNE4Q8N205 AC093899.1-201ENST00000457984 376 ntBASIC5.49□□□□□ -1.53
SYNE4Q8N205 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.49□□□□□ -1.53
SYNE4Q8N205 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.49□□□□□ -1.53
SYNE4Q8N205 ATP1B1P1-201ENST00000509767 915 ntBASIC5.49□□□□□ -1.53
SYNE4Q8N205 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.49□□□□□ -1.53
SYNE4Q8N205 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.49□□□□□ -1.53
SYNE4Q8N205 RNA5SP446-201ENST00000515955 82 ntBASIC5.49□□□□□ -1.53
SYNE4Q8N205 RNU6-720P-201ENST00000516363 108 ntBASIC5.49□□□□□ -1.53
SYNE4Q8N205 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.49□□□□□ -1.53
SYNE4Q8N205 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC5.49□□□□□ -1.53
SYNE4Q8N205 OR5BC1P-201ENST00000529327 739 ntBASIC5.49□□□□□ -1.53
SYNE4Q8N205 DEFB130C-202ENST00000530001 230 ntBASIC5.49□□□□□ -1.53
SYNE4Q8N205 AP000889.1-201ENST00000530968 660 ntBASIC5.49□□□□□ -1.53
SYNE4Q8N205 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.49□□□□□ -1.53
SYNE4Q8N205 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.49□□□□□ -1.53
SYNE4Q8N205 DUX4L52-201ENST00000549363 777 ntBASIC5.49□□□□□ -1.53
SYNE4Q8N205 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.49□□□□□ -1.53
SYNE4Q8N205 AL049870.4-201ENST00000555741 486 ntBASIC5.49□□□□□ -1.53
SYNE4Q8N205 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.49□□□□□ -1.53
SYNE4Q8N205 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.49□□□□□ -1.53
SYNE4Q8N205 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.49□□□□□ -1.53
SYNE4Q8N205 CLPTM1LP1-201ENST00000604519 484 ntBASIC5.49□□□□□ -1.53
SYNE4Q8N205 AC011374.2-201ENST00000607135 526 ntBASIC5.49□□□□□ -1.53
SYNE4Q8N205 AL135786.2-201ENST00000608422 615 ntBASIC5.49□□□□□ -1.53
SYNE4Q8N205 AC069234.5-201ENST00000611056 416 ntBASIC5.49□□□□□ -1.53
SYNE4Q8N205 AC092794.1-201ENST00000612734 582 ntBASIC5.49□□□□□ -1.53
SYNE4Q8N205 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.49□□□□□ -1.53
SYNE4Q8N205 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.49□□□□□ -1.53
SYNE4Q8N205 AC025588.4-201ENST00000615802 908 ntBASIC5.49□□□□□ -1.53
SYNE4Q8N205 MIR8059-201ENST00000620427 81 ntBASIC5.49□□□□□ -1.53
SYNE4Q8N205 MIR6075-201ENST00000620782 95 ntBASIC5.49□□□□□ -1.53
SYNE4Q8N205 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SYNE4Q8N205 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.49□□□□□ -1.53
SYNE4Q8N205 AC006042.3-201ENST00000454684 1469 ntBASIC5.49□□□□□ -1.53
SYNE4Q8N205 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.49□□□□□ -1.53
SYNE4Q8N205 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SYNE4Q8N205 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SYNE4Q8N205 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
SYNE4Q8N205 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
SYNE4Q8N205 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SYNE4Q8N205 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SYNE4Q8N205 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SYNE4Q8N205 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.48□□□□□ -1.53
SYNE4Q8N205 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
SYNE4Q8N205 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.48□□□□□ -1.53
SYNE4Q8N205 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SYNE4Q8N205 AL359922.3-201ENST00000624779 1670 ntBASIC5.48□□□□□ -1.53
SYNE4Q8N205 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.48□□□□□ -1.53
SYNE4Q8N205 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SYNE4Q8N205 RNU6-1215P-201ENST00000384441 102 ntBASIC5.48□□□□□ -1.53
SYNE4Q8N205 U3.23-201ENST00000391132 200 ntBASIC5.48□□□□□ -1.53
SYNE4Q8N205 AL590084.2-201ENST00000401481 382 ntBASIC5.48□□□□□ -1.53
SYNE4Q8N205 AL133264.1-201ENST00000407157 562 ntBASIC5.48□□□□□ -1.53
SYNE4Q8N205 NPM1P11-201ENST00000417106 855 ntBASIC5.48□□□□□ -1.53
SYNE4Q8N205 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.48□□□□□ -1.53
SYNE4Q8N205 Z74021.1-201ENST00000423610 407 ntBASIC5.48□□□□□ -1.53
SYNE4Q8N205 COX6CP15-201ENST00000426313 211 ntBASIC5.48□□□□□ -1.53
SYNE4Q8N205 ETF1P3-201ENST00000430422 1160 ntBASIC5.48□□□□□ -1.53
SYNE4Q8N205 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms