Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
HERC6Q8IVU3 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HERC6Q8IVU3 RNU6-115P-201ENST00000364310 107 ntBASIC4.87□□□□□ -1.63
HERC6Q8IVU3 RNA5SP283-201ENST00000365604 119 ntBASIC4.87□□□□□ -1.63
HERC6Q8IVU3 MIR554-201ENST00000384874 96 ntBASIC4.87□□□□□ -1.63
HERC6Q8IVU3 RNU6-1300P-201ENST00000391046 108 ntBASIC4.87□□□□□ -1.63
HERC6Q8IVU3 AP000580.1-201ENST00000404439 358 ntBASIC4.87□□□□□ -1.63
HERC6Q8IVU3 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.87□□□□□ -1.63
HERC6Q8IVU3 EIF4A1P3-201ENST00000411521 244 ntBASIC4.87□□□□□ -1.63
HERC6Q8IVU3 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.87□□□□□ -1.63
HERC6Q8IVU3 E2F6P2-201ENST00000420708 748 ntBASIC4.87□□□□□ -1.63
HERC6Q8IVU3 GTF2IP23-201ENST00000423746 351 ntBASIC4.87□□□□□ -1.63
HERC6Q8IVU3 RPL30P3-201ENST00000424262 333 ntBASIC4.87□□□□□ -1.63
HERC6Q8IVU3 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.87□□□□□ -1.63
HERC6Q8IVU3 MOB1AP1-201ENST00000430903 535 ntBASIC4.87□□□□□ -1.63
HERC6Q8IVU3 AL513175.1-201ENST00000431492 780 ntBASIC4.87□□□□□ -1.63
HERC6Q8IVU3 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.87□□□□□ -1.63
HERC6Q8IVU3 AC004938.1-201ENST00000438468 308 ntBASIC4.87□□□□□ -1.63
HERC6Q8IVU3 ELOCP13-201ENST00000443934 329 ntBASIC4.87□□□□□ -1.63
HERC6Q8IVU3 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.87□□□□□ -1.63
HERC6Q8IVU3 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.87□□□□□ -1.63
HERC6Q8IVU3 AC098826.2-201ENST00000452011 651 ntBASIC4.87□□□□□ -1.63
HERC6Q8IVU3 NDUFA5P7-201ENST00000452914 242 ntBASIC4.87□□□□□ -1.63
HERC6Q8IVU3 DHFRP3-201ENST00000455595 559 ntBASIC4.87□□□□□ -1.63
HERC6Q8IVU3 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC4.87□□□□□ -1.63
HERC6Q8IVU3 AC108734.3-201ENST00000481241 1165 ntBASIC4.87□□□□□ -1.63
HERC6Q8IVU3 AL132838.2-201ENST00000492041 314 ntBASIC4.87□□□□□ -1.63
HERC6Q8IVU3 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.87□□□□□ -1.63
HERC6Q8IVU3 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HERC6Q8IVU3 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.87□□□□□ -1.63
HERC6Q8IVU3 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.87□□□□□ -1.63
HERC6Q8IVU3 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.87□□□□□ -1.63
HERC6Q8IVU3 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.87□□□□□ -1.63
HERC6Q8IVU3 AC015688.2-201ENST00000584523 262 ntBASIC4.87□□□□□ -1.63
HERC6Q8IVU3 AP001269.3-201ENST00000588718 329 ntBASIC4.87□□□□□ -1.63
HERC6Q8IVU3 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.87□□□□□ -1.63
HERC6Q8IVU3 AL359535.1-201ENST00000612100 1087 ntBASIC4.87□□□□□ -1.63
HERC6Q8IVU3 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.87□□□□□ -1.63
HERC6Q8IVU3 AC013470.4-201ENST00000619978 986 ntBASIC4.87□□□□□ -1.63
HERC6Q8IVU3 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.87□□□□□ -1.63
HERC6Q8IVU3 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HERC6Q8IVU3 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
HERC6Q8IVU3 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HERC6Q8IVU3 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HERC6Q8IVU3 AL359922.3-201ENST00000624779 1670 ntBASIC4.86□□□□□ -1.63
HERC6Q8IVU3 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HERC6Q8IVU3 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
HERC6Q8IVU3 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HERC6Q8IVU3 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
HERC6Q8IVU3 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HERC6Q8IVU3 AC008033.1-201ENST00000216407 1162 ntBASIC4.86□□□□□ -1.63
HERC6Q8IVU3 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
HERC6Q8IVU3 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.86□□□□□ -1.63
HERC6Q8IVU3 AL133264.1-201ENST00000407157 562 ntBASIC4.86□□□□□ -1.63
HERC6Q8IVU3 AL139098.1-201ENST00000407291 389 ntBASIC4.86□□□□□ -1.63
HERC6Q8IVU3 U3.35-201ENST00000408405 208 ntBASIC4.86□□□□□ -1.63
HERC6Q8IVU3 AC004022.2-201ENST00000413824 193 ntBASIC4.86□□□□□ -1.63
HERC6Q8IVU3 SNRPFP1-201ENST00000414761 252 ntBASIC4.86□□□□□ -1.63
HERC6Q8IVU3 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.86□□□□□ -1.63
HERC6Q8IVU3 AC008280.1-201ENST00000418851 412 ntBASIC4.86□□□□□ -1.63
HERC6Q8IVU3 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.86□□□□□ -1.63
HERC6Q8IVU3 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.86□□□□□ -1.63
HERC6Q8IVU3 MRPS36P1-201ENST00000421291 307 ntBASIC4.86□□□□□ -1.63
HERC6Q8IVU3 Z93242.1-201ENST00000427102 353 ntBASIC4.86□□□□□ -1.63
HERC6Q8IVU3 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.86□□□□□ -1.63
HERC6Q8IVU3 AC010881.1-201ENST00000433830 235 ntBASIC4.86□□□□□ -1.63
HERC6Q8IVU3 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC4.86□□□□□ -1.63
HERC6Q8IVU3 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.86□□□□□ -1.63
HERC6Q8IVU3 RAB11AP1-201ENST00000442978 646 ntBASIC4.86□□□□□ -1.63
HERC6Q8IVU3 RPS26P56-201ENST00000444468 240 ntBASIC4.86□□□□□ -1.63
HERC6Q8IVU3 AL591719.1-201ENST00000444669 744 ntBASIC4.86□□□□□ -1.63
HERC6Q8IVU3 RPL23AP43-201ENST00000446445 471 ntBASIC4.86□□□□□ -1.63
HERC6Q8IVU3 PTENP1-201ENST00000447117 1215 ntBASIC4.86□□□□□ -1.63
HERC6Q8IVU3 VN1R34P-201ENST00000447387 883 ntBASIC4.86□□□□□ -1.63
HERC6Q8IVU3 ISCUP1-201ENST00000454451 448 ntBASIC4.86□□□□□ -1.63
HERC6Q8IVU3 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HERC6Q8IVU3 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.86□□□□□ -1.63
HERC6Q8IVU3 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.86□□□□□ -1.63
HERC6Q8IVU3 RN7SKP287-201ENST00000516546 266 ntBASIC4.86□□□□□ -1.63
HERC6Q8IVU3 RNU1-45P-201ENST00000517191 141 ntBASIC4.86□□□□□ -1.63
HERC6Q8IVU3 HMGB1P19-201ENST00000517578 577 ntBASIC4.86□□□□□ -1.63
HERC6Q8IVU3 EEF1A1P37-201ENST00000522748 715 ntBASIC4.86□□□□□ -1.63
HERC6Q8IVU3 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.86□□□□□ -1.63
HERC6Q8IVU3 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HERC6Q8IVU3 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HERC6Q8IVU3 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HERC6Q8IVU3 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.86□□□□□ -1.63
HERC6Q8IVU3 MTCYBP27-201ENST00000555160 670 ntBASIC4.86□□□□□ -1.63
HERC6Q8IVU3 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.86□□□□□ -1.63
HERC6Q8IVU3 AC093424.1-201ENST00000604999 338 ntBASIC4.86□□□□□ -1.63
HERC6Q8IVU3 AL354760.1-201ENST00000608357 643 ntBASIC4.86□□□□□ -1.63
HERC6Q8IVU3 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.86□□□□□ -1.63
HERC6Q8IVU3 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HERC6Q8IVU3 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.86□□□□□ -1.63
HERC6Q8IVU3 uc_338.13-201ENST00000618243 179 ntBASIC4.86□□□□□ -1.63
HERC6Q8IVU3 MIR8059-201ENST00000620427 81 ntBASIC4.86□□□□□ -1.63
HERC6Q8IVU3 SEPT7P7-201ENST00000420492 1301 ntBASIC4.86□□□□□ -1.63
HERC6Q8IVU3 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HERC6Q8IVU3 LARP1BP1-201ENST00000506036 1359 ntBASIC4.86□□□□□ -1.63
HERC6Q8IVU3 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms