Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AL031736.2-201ENST00000426573 787 ntBASIC3.71□□□□□ -1.82
NUDCD3Q8IVD9 HMGB3P5-201ENST00000428894 612 ntBASIC3.71□□□□□ -1.82
NUDCD3Q8IVD9 ELOCP6-201ENST00000429066 328 ntBASIC3.71□□□□□ -1.82
NUDCD3Q8IVD9 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.71□□□□□ -1.82
NUDCD3Q8IVD9 AL138799.3-201ENST00000438968 350 ntBASIC3.71□□□□□ -1.82
NUDCD3Q8IVD9 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.71□□□□□ -1.82
NUDCD3Q8IVD9 AC007000.2-201ENST00000442564 487 ntBASIC3.71□□□□□ -1.82
NUDCD3Q8IVD9 CYCSP42-201ENST00000450823 238 ntBASIC3.71□□□□□ -1.82
NUDCD3Q8IVD9 CEACAMP4-201ENST00000457676 421 ntBASIC3.71□□□□□ -1.82
NUDCD3Q8IVD9 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.71□□□□□ -1.82
NUDCD3Q8IVD9 ELOCP12-201ENST00000458706 328 ntBASIC3.71□□□□□ -1.82
NUDCD3Q8IVD9 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.71□□□□□ -1.82
NUDCD3Q8IVD9 RPL23AP73-201ENST00000492507 471 ntBASIC3.71□□□□□ -1.82
NUDCD3Q8IVD9 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.71□□□□□ -1.82
NUDCD3Q8IVD9 AC106806.2-201ENST00000509365 500 ntBASIC3.71□□□□□ -1.82
NUDCD3Q8IVD9 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.71□□□□□ -1.82
NUDCD3Q8IVD9 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.71□□□□□ -1.82
NUDCD3Q8IVD9 AP003730.1-201ENST00000524605 285 ntBASIC3.71□□□□□ -1.82
NUDCD3Q8IVD9 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.71□□□□□ -1.82
NUDCD3Q8IVD9 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.71□□□□□ -1.82
NUDCD3Q8IVD9 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.71□□□□□ -1.82
NUDCD3Q8IVD9 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.71□□□□□ -1.82
NUDCD3Q8IVD9 MIR5096-201ENST00000583713 70 ntBASIC3.71□□□□□ -1.82
NUDCD3Q8IVD9 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.71□□□□□ -1.82
NUDCD3Q8IVD9 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.71□□□□□ -1.82
NUDCD3Q8IVD9 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.71□□□□□ -1.82
NUDCD3Q8IVD9 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.71□□□□□ -1.82
NUDCD3Q8IVD9 AC008745.1-201ENST00000604064 271 ntBASIC3.71□□□□□ -1.82
NUDCD3Q8IVD9 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
NUDCD3Q8IVD9 AL163642.2-201ENST00000604722 1019 ntBASIC3.71□□□□□ -1.82
NUDCD3Q8IVD9 AC011374.2-201ENST00000607135 526 ntBASIC3.71□□□□□ -1.82
NUDCD3Q8IVD9 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.71□□□□□ -1.82
NUDCD3Q8IVD9 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.71□□□□□ -1.82
NUDCD3Q8IVD9 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
NUDCD3Q8IVD9 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NUDCD3Q8IVD9 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
NUDCD3Q8IVD9 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NUDCD3Q8IVD9 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NUDCD3Q8IVD9 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 METTL21EP-201ENST00000298105 713 ntBASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 HMGB1P10-201ENST00000395823 563 ntBASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 AC004987.3-201ENST00000413879 771 ntBASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 AC006989.1-201ENST00000427212 131 ntBASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 NDUFB1P1-201ENST00000435191 180 ntBASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 MTCO3P43-201ENST00000440974 771 ntBASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 ARL5AP2-201ENST00000444698 533 ntBASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 AC069540.1-201ENST00000446320 988 ntBASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 RPL23AP23-201ENST00000452590 471 ntBASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 RPL37P3-201ENST00000456825 293 ntBASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 AC004801.2-202ENST00000463559 283 ntBASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 RPL37P6-202ENST00000464216 403 ntBASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 AC110792.1-201ENST00000491826 472 ntBASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 RN7SKP82-201ENST00000516786 223 ntBASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 AC103833.1-201ENST00000517442 172 ntBASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 AC022695.1-201ENST00000522089 237 ntBASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 CIR1P1-201ENST00000524055 1133 ntBASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 AL121766.1-201ENST00000547436 487 ntBASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 AL731537.2-201ENST00000561565 951 ntBASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 MIR4425-201ENST00000580572 84 ntBASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 AC018618.2-201ENST00000604770 446 ntBASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 ARF4P1-201ENST00000605447 541 ntBASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 SNORA62.6-201ENST00000606322 83 ntBASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 AL592295.2-201ENST00000612578 206 ntBASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 AL391261.4-201ENST00000616012 481 ntBASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.7□□□□□ -1.82
NUDCD3Q8IVD9 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 PWAR6-201ENST00000552334 4618 ntBASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 RNU6-252P-201ENST00000363232 107 ntBASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 RNA5SP130-201ENST00000364431 114 ntBASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 SNORD6-201ENST00000365444 73 ntBASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 MIR184-201ENST00000384962 84 ntBASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 RNA5SP424-201ENST00000390988 115 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms