Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
PRPF39Q86UA1 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.46□□□□□ -1.69
PRPF39Q86UA1 AC068254.2-201ENST00000623938 3577 ntBASIC4.46□□□□□ -1.7
PRPF39Q86UA1 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.46□□□□□ -1.7
PRPF39Q86UA1 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.46□□□□□ -1.7
PRPF39Q86UA1 RNU6-619P-201ENST00000365146 108 ntBASIC4.46□□□□□ -1.7
PRPF39Q86UA1 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
PRPF39Q86UA1 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
PRPF39Q86UA1 MIR93-201ENST00000385024 80 ntBASIC4.46□□□□□ -1.7
PRPF39Q86UA1 ENSAP1-201ENST00000392855 326 ntBASIC4.46□□□□□ -1.7
PRPF39Q86UA1 SSXP10-201ENST00000402595 565 ntBASIC4.46□□□□□ -1.7
PRPF39Q86UA1 RPS20P14-201ENST00000412545 360 ntBASIC4.46□□□□□ -1.7
PRPF39Q86UA1 AC096632.1-201ENST00000427395 310 ntBASIC4.46□□□□□ -1.7
PRPF39Q86UA1 AC092634.2-201ENST00000428146 1010 ntBASIC4.46□□□□□ -1.7
PRPF39Q86UA1 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.46□□□□□ -1.7
PRPF39Q86UA1 CKS1BP5-201ENST00000434172 273 ntBASIC4.46□□□□□ -1.7
PRPF39Q86UA1 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.46□□□□□ -1.7
PRPF39Q86UA1 Z77249.1-201ENST00000444622 1175 ntBASIC4.46□□□□□ -1.7
PRPF39Q86UA1 NPM1P13-201ENST00000452663 865 ntBASIC4.46□□□□□ -1.7
PRPF39Q86UA1 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.46□□□□□ -1.7
PRPF39Q86UA1 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.46□□□□□ -1.7
PRPF39Q86UA1 AC018797.3-201ENST00000513388 1241 ntBASIC4.46□□□□□ -1.7
PRPF39Q86UA1 AC016065.2-201ENST00000514530 444 ntBASIC4.46□□□□□ -1.7
PRPF39Q86UA1 RNU6-1028P-201ENST00000517164 93 ntBASIC4.46□□□□□ -1.7
PRPF39Q86UA1 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.46□□□□□ -1.7
PRPF39Q86UA1 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.46□□□□□ -1.7
PRPF39Q86UA1 AC010376.1-201ENST00000522101 334 ntBASIC4.46□□□□□ -1.7
PRPF39Q86UA1 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.46□□□□□ -1.7
PRPF39Q86UA1 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.46□□□□□ -1.7
PRPF39Q86UA1 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PRPF39Q86UA1 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.46□□□□□ -1.7
PRPF39Q86UA1 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.46□□□□□ -1.7
PRPF39Q86UA1 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PRPF39Q86UA1 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.46□□□□□ -1.7
PRPF39Q86UA1 AC083899.3-201ENST00000603413 594 ntBASIC4.46□□□□□ -1.7
PRPF39Q86UA1 AC073387.2-201ENST00000604797 784 ntBASIC4.46□□□□□ -1.7
PRPF39Q86UA1 AL354760.1-201ENST00000608357 643 ntBASIC4.46□□□□□ -1.7
PRPF39Q86UA1 AC068831.8-201ENST00000620171 435 ntBASIC4.46□□□□□ -1.7
PRPF39Q86UA1 AC068724.3-201ENST00000625906 87 ntBASIC4.46□□□□□ -1.7
PRPF39Q86UA1 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PRPF39Q86UA1 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PRPF39Q86UA1 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.46□□□□□ -1.7
PRPF39Q86UA1 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.46□□□□□ -1.7
PRPF39Q86UA1 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
PRPF39Q86UA1 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.46□□□□□ -1.7
PRPF39Q86UA1 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.46□□□□□ -1.7
PRPF39Q86UA1 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PRPF39Q86UA1 AL122126.1-201ENST00000546905 1318 ntBASIC4.46□□□□□ -1.7
PRPF39Q86UA1 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.45□□□□□ -1.7
PRPF39Q86UA1 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PRPF39Q86UA1 AC016588.2-201ENST00000632484 3021 ntBASIC4.45□□□□□ -1.7
PRPF39Q86UA1 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
PRPF39Q86UA1 ANKRD36P1-201ENST00000344424 659 ntBASIC4.45□□□□□ -1.7
PRPF39Q86UA1 RHOT1P2-201ENST00000366423 333 ntBASIC4.45□□□□□ -1.7
PRPF39Q86UA1 SNORA70C-201ENST00000384538 135 ntBASIC4.45□□□□□ -1.7
PRPF39Q86UA1 MTCO3P31-201ENST00000405526 789 ntBASIC4.45□□□□□ -1.7
PRPF39Q86UA1 MIR1911-201ENST00000410783 80 ntBASIC4.45□□□□□ -1.7
PRPF39Q86UA1 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.45□□□□□ -1.7
PRPF39Q86UA1 AC004552.1-201ENST00000419089 348 ntBASIC4.45□□□□□ -1.7
PRPF39Q86UA1 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.45□□□□□ -1.7
PRPF39Q86UA1 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PRPF39Q86UA1 AL354692.1-201ENST00000423044 315 ntBASIC4.45□□□□□ -1.7
PRPF39Q86UA1 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.45□□□□□ -1.7
PRPF39Q86UA1 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.45□□□□□ -1.7
PRPF39Q86UA1 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.45□□□□□ -1.7
PRPF39Q86UA1 COX6CP15-201ENST00000426313 211 ntBASIC4.45□□□□□ -1.7
PRPF39Q86UA1 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.45□□□□□ -1.7
PRPF39Q86UA1 MTCYBP32-201ENST00000427945 1084 ntBASIC4.45□□□□□ -1.7
PRPF39Q86UA1 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.45□□□□□ -1.7
PRPF39Q86UA1 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.45□□□□□ -1.7
PRPF39Q86UA1 PTGES3P1-201ENST00000439531 483 ntBASIC4.45□□□□□ -1.7
PRPF39Q86UA1 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PRPF39Q86UA1 RPL29P29-201ENST00000448725 423 ntBASIC4.45□□□□□ -1.7
PRPF39Q86UA1 VN1R32P-201ENST00000452234 905 ntBASIC4.45□□□□□ -1.7
PRPF39Q86UA1 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PRPF39Q86UA1 FCF1P6-201ENST00000456841 595 ntBASIC4.45□□□□□ -1.7
PRPF39Q86UA1 NF1P3-201ENST00000457709 450 ntBASIC4.45□□□□□ -1.7
PRPF39Q86UA1 SNORD108-201ENST00000459332 71 ntBASIC4.45□□□□□ -1.7
PRPF39Q86UA1 RPS26P3-201ENST00000470205 348 ntBASIC4.45□□□□□ -1.7
PRPF39Q86UA1 AC090543.2-201ENST00000483963 348 ntBASIC4.45□□□□□ -1.7
PRPF39Q86UA1 AC105137.1-201ENST00000484355 562 ntBASIC4.45□□□□□ -1.7
PRPF39Q86UA1 AC004057.1-201ENST00000485827 348 ntBASIC4.45□□□□□ -1.7
PRPF39Q86UA1 ATP1B1P1-201ENST00000509767 915 ntBASIC4.45□□□□□ -1.7
PRPF39Q86UA1 AC006499.6-201ENST00000511169 607 ntBASIC4.45□□□□□ -1.7
PRPF39Q86UA1 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.45□□□□□ -1.7
PRPF39Q86UA1 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.45□□□□□ -1.7
PRPF39Q86UA1 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.45□□□□□ -1.7
PRPF39Q86UA1 IFITM8P-201ENST00000522529 394 ntBASIC4.45□□□□□ -1.7
PRPF39Q86UA1 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.45□□□□□ -1.7
PRPF39Q86UA1 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PRPF39Q86UA1 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.45□□□□□ -1.7
PRPF39Q86UA1 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.45□□□□□ -1.7
PRPF39Q86UA1 AL109766.1-201ENST00000555080 552 ntBASIC4.45□□□□□ -1.7
PRPF39Q86UA1 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.45□□□□□ -1.7
PRPF39Q86UA1 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.45□□□□□ -1.7
PRPF39Q86UA1 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.45□□□□□ -1.7
PRPF39Q86UA1 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.45□□□□□ -1.7
PRPF39Q86UA1 AC007224.1-201ENST00000564410 144 ntBASIC4.45□□□□□ -1.7
PRPF39Q86UA1 CYP4A43P-201ENST00000568156 121 ntBASIC4.45□□□□□ -1.7
PRPF39Q86UA1 AC069366.1-201ENST00000583159 838 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms