Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 HSPD1P8-201ENST00000400121 1658 ntBASIC6.38□□□□□ -1.39
LYSMD3Q7Z3D4 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
LYSMD3Q7Z3D4 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
LYSMD3Q7Z3D4 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.38□□□□□ -1.39
LYSMD3Q7Z3D4 NLRP3P1-201ENST00000622303 1785 ntBASIC6.38□□□□□ -1.39
LYSMD3Q7Z3D4 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LYSMD3Q7Z3D4 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LYSMD3Q7Z3D4 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LYSMD3Q7Z3D4 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
LYSMD3Q7Z3D4 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 AC130304.1-201ENST00000622942 2385 ntBASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 Y_RNA.80-201ENST00000362996 102 ntBASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 Y_RNA.167-201ENST00000363735 109 ntBASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 Y_RNA.512-201ENST00000384518 102 ntBASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 MIR454-201ENST00000390180 115 ntBASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 RNU6-1109P-201ENST00000391187 107 ntBASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 VDAC1P9-201ENST00000412766 841 ntBASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 AC009965.2-201ENST00000425328 970 ntBASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 AC073069.1-201ENST00000428657 441 ntBASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 RPL7P52-201ENST00000449200 742 ntBASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 HMGB1P15-201ENST00000453854 435 ntBASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 SNX18P26-201ENST00000458433 740 ntBASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 AC058823.1-201ENST00000485315 474 ntBASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 RN7SL714P-201ENST00000487050 298 ntBASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 AC008638.1-201ENST00000506035 866 ntBASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 RNU6-202P-201ENST00000515998 96 ntBASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 AC022360.1-201ENST00000521058 340 ntBASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 AC008562.1-201ENST00000521763 330 ntBASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 CYCSP25-201ENST00000525280 316 ntBASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 AP003497.1-201ENST00000528472 562 ntBASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 AC022882.1-201ENST00000532142 501 ntBASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 LARP7P2-201ENST00000575306 125 ntBASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 AC022884.3-201ENST00000579571 248 ntBASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 SNORD39.3-201ENST00000584451 71 ntBASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 AC104695.3-201ENST00000604052 296 ntBASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 AL121612.2-201ENST00000612261 482 ntBASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 AC024255.1-201ENST00000614376 102 ntBASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 uc_338.29-201ENST00000615099 168 ntBASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 AC073593.1-201ENST00000624500 411 ntBASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 AL669831.3-213ENST00000636676 183 ntBASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 AL161901.1-201ENST00000624954 3425 ntBASIC6.37□□□□□ -1.39
LYSMD3Q7Z3D4 AL136984.1-201ENST00000607611 1893 ntBASIC6.36□□□□□ -1.39
LYSMD3Q7Z3D4 CASC19-246ENST00000641625 1606 ntBASIC6.36□□□□□ -1.39
LYSMD3Q7Z3D4 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
LYSMD3Q7Z3D4 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.36□□□□□ -1.39
LYSMD3Q7Z3D4 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
LYSMD3Q7Z3D4 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
LYSMD3Q7Z3D4 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.36□□□□□ -1.39
LYSMD3Q7Z3D4 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.36□□□□□ -1.39
LYSMD3Q7Z3D4 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.36□□□□□ -1.39
LYSMD3Q7Z3D4 Y_RNA.378-201ENST00000365652 113 ntBASIC6.36□□□□□ -1.39
LYSMD3Q7Z3D4 AL136131.1-201ENST00000406079 803 ntBASIC6.36□□□□□ -1.39
LYSMD3Q7Z3D4 BX323014.1-201ENST00000412876 237 ntBASIC6.36□□□□□ -1.39
LYSMD3Q7Z3D4 CBX1P3-201ENST00000413296 527 ntBASIC6.36□□□□□ -1.39
LYSMD3Q7Z3D4 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC6.36□□□□□ -1.39
LYSMD3Q7Z3D4 AC007562.1-201ENST00000421819 517 ntBASIC6.36□□□□□ -1.39
LYSMD3Q7Z3D4 CHIAP3-201ENST00000423668 1133 ntBASIC6.36□□□□□ -1.39
LYSMD3Q7Z3D4 SDAD1P3-201ENST00000427380 333 ntBASIC6.36□□□□□ -1.39
LYSMD3Q7Z3D4 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.36□□□□□ -1.39
LYSMD3Q7Z3D4 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.36□□□□□ -1.39
LYSMD3Q7Z3D4 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
LYSMD3Q7Z3D4 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC6.36□□□□□ -1.39
LYSMD3Q7Z3D4 RN7SL369P-201ENST00000477138 299 ntBASIC6.36□□□□□ -1.39
LYSMD3Q7Z3D4 RPL7P43-201ENST00000478876 753 ntBASIC6.36□□□□□ -1.39
LYSMD3Q7Z3D4 RPL22P13-201ENST00000493291 347 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms