Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 MAPK10-372ENST00000641954 3413 ntBASIC4.15□□□□□ -1.74
NUP54Q7Z3B4 Z98755.1-201ENST00000407015 1384 ntBASIC4.15□□□□□ -1.74
NUP54Q7Z3B4 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
NUP54Q7Z3B4 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.15□□□□□ -1.74
NUP54Q7Z3B4 FAM91A3P-201ENST00000456826 2544 ntBASIC4.15□□□□□ -1.74
NUP54Q7Z3B4 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 IL6STP1-201ENST00000346911 1020 ntBASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 RNU4-51P-201ENST00000364206 140 ntBASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 RNU6-619P-201ENST00000365146 108 ntBASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 RNU6-444P-201ENST00000383988 108 ntBASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 RPS3AP9-201ENST00000417027 792 ntBASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 PAICSP7-201ENST00000419829 962 ntBASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 CNOT7P1-201ENST00000429006 852 ntBASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 RPL21P112-201ENST00000434403 463 ntBASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 RPL23AP43-201ENST00000446445 471 ntBASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 AC005008.1-201ENST00000456151 612 ntBASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 AC012158.1-204ENST00000483430 465 ntBASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 AP001086.1-201ENST00000494882 321 ntBASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 RPL21P131-201ENST00000497298 483 ntBASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 AC021146.3-201ENST00000511911 260 ntBASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 RNA5SP73-201ENST00000516744 108 ntBASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 AL049838.1-201ENST00000563647 981 ntBASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 IGHV3-29-201ENST00000604817 344 ntBASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 AP000238.1-201ENST00000608759 426 ntBASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 uc_338.18-201ENST00000615451 175 ntBASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 AL121873.1-201ENST00000616013 524 ntBASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 AC091905.2-201ENST00000623143 306 ntBASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 AC006065.6-201ENST00000625201 545 ntBASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.15□□□□□ -1.75
NUP54Q7Z3B4 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 RNU6-224P-201ENST00000384055 107 ntBASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 SSXP10-201ENST00000402595 565 ntBASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 SFR1P1-201ENST00000403720 688 ntBASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 ZNF603P-201ENST00000405613 487 ntBASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 RNU6-575P-201ENST00000411326 105 ntBASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 AC073264.1-201ENST00000411508 416 ntBASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 AL449283.1-202ENST00000418249 604 ntBASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 PTP4A1P5-201ENST00000420305 455 ntBASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 CYP4F29P-201ENST00000420685 446 ntBASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 RPS27AP7-201ENST00000422792 455 ntBASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 AC005517.2-201ENST00000424673 553 ntBASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 C1DP1-201ENST00000426049 402 ntBASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 DNAJC19P7-201ENST00000428811 344 ntBASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 NPM1P13-201ENST00000452663 865 ntBASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 MTND2P28-201ENST00000457540 1044 ntBASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 AC015795.1-201ENST00000513669 327 ntBASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 OR8K4P-201ENST00000534608 872 ntBASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 MTCYBP23-201ENST00000558717 1102 ntBASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 EIF5A2P1-201ENST00000564027 460 ntBASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 MIR4760-201ENST00000585040 80 ntBASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms