Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.59□□□□□ -1.67
PTCHD4Q6ZW05 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.59□□□□□ -1.67
PTCHD4Q6ZW05 RN7SL717P-201ENST00000478343 297 ntBASIC4.59□□□□□ -1.67
PTCHD4Q6ZW05 SIAH1P1-201ENST00000479411 923 ntBASIC4.59□□□□□ -1.67
PTCHD4Q6ZW05 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.59□□□□□ -1.67
PTCHD4Q6ZW05 RN7SL214P-201ENST00000487317 265 ntBASIC4.59□□□□□ -1.67
PTCHD4Q6ZW05 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.59□□□□□ -1.67
PTCHD4Q6ZW05 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.59□□□□□ -1.67
PTCHD4Q6ZW05 AC109458.1-201ENST00000508858 316 ntBASIC4.59□□□□□ -1.67
PTCHD4Q6ZW05 KRT19P6-201ENST00000510983 209 ntBASIC4.59□□□□□ -1.67
PTCHD4Q6ZW05 RNU6-488P-201ENST00000515918 99 ntBASIC4.59□□□□□ -1.67
PTCHD4Q6ZW05 RNU6-583P-201ENST00000516012 92 ntBASIC4.59□□□□□ -1.67
PTCHD4Q6ZW05 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.59□□□□□ -1.67
PTCHD4Q6ZW05 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
PTCHD4Q6ZW05 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.59□□□□□ -1.67
PTCHD4Q6ZW05 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.59□□□□□ -1.67
PTCHD4Q6ZW05 AC137768.1-201ENST00000549998 553 ntBASIC4.59□□□□□ -1.67
PTCHD4Q6ZW05 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
PTCHD4Q6ZW05 SERPINE4P-201ENST00000554978 281 ntBASIC4.59□□□□□ -1.67
PTCHD4Q6ZW05 AC027807.1-201ENST00000559921 996 ntBASIC4.59□□□□□ -1.67
PTCHD4Q6ZW05 AC074051.3-201ENST00000570238 358 ntBASIC4.59□□□□□ -1.67
PTCHD4Q6ZW05 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.59□□□□□ -1.67
PTCHD4Q6ZW05 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.59□□□□□ -1.67
PTCHD4Q6ZW05 KPNA2P3-201ENST00000584190 848 ntBASIC4.59□□□□□ -1.67
PTCHD4Q6ZW05 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PTCHD4Q6ZW05 AL596327.1-201ENST00000603629 213 ntBASIC4.59□□□□□ -1.67
PTCHD4Q6ZW05 AL021997.1-201ENST00000605757 193 ntBASIC4.59□□□□□ -1.67
PTCHD4Q6ZW05 AC012360.2-201ENST00000609349 391 ntBASIC4.59□□□□□ -1.67
PTCHD4Q6ZW05 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PTCHD4Q6ZW05 AC109309.2-201ENST00000612597 332 ntBASIC4.59□□□□□ -1.67
PTCHD4Q6ZW05 AC100793.4-201ENST00000613683 429 ntBASIC4.59□□□□□ -1.67
PTCHD4Q6ZW05 AC123768.4-201ENST00000616244 701 ntBASIC4.59□□□□□ -1.67
PTCHD4Q6ZW05 AL356121.2-201ENST00000624715 780 ntBASIC4.59□□□□□ -1.67
PTCHD4Q6ZW05 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.59□□□□□ -1.67
PTCHD4Q6ZW05 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
PTCHD4Q6ZW05 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.59□□□□□ -1.68
PTCHD4Q6ZW05 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PTCHD4Q6ZW05 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PTCHD4Q6ZW05 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 PABPC1P9-201ENST00000426076 1612 ntBASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 AL356473.1-201ENST00000406203 1408 ntBASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 RNU6-657P-201ENST00000383904 107 ntBASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 Y_RNA.517-201ENST00000384551 106 ntBASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 RNY3P10-201ENST00000384764 102 ntBASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 MIR506-201ENST00000384998 124 ntBASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 SNORA17A-201ENST00000391185 133 ntBASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 RNA5SP178-201ENST00000410380 128 ntBASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 RNU2-16P-201ENST00000410712 136 ntBASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 AP000534.2-201ENST00000412729 568 ntBASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 CDK8P2-201ENST00000415020 547 ntBASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 AC092647.1-201ENST00000420654 287 ntBASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 AC005033.1-201ENST00000428904 813 ntBASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 UBE2FP3-201ENST00000436366 524 ntBASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 AL512286.1-201ENST00000439244 400 ntBASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 CDC27P1-201ENST00000445384 715 ntBASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 ST13P20-201ENST00000447996 1065 ntBASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 RPL26P28-201ENST00000451325 435 ntBASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 RPL5P32-201ENST00000454085 879 ntBASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 Z92846.1-201ENST00000456203 268 ntBASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 CFTRP1-201ENST00000456646 183 ntBASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 RPS4XP20-201ENST00000505751 772 ntBASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 RNA5SP360-201ENST00000516555 118 ntBASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 AC079089.3-201ENST00000603094 673 ntBASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 AC073648.5-201ENST00000603502 305 ntBASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 AC068276.1-201ENST00000605793 379 ntBASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 AP001521.1-201ENST00000609150 300 ntBASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 AC015540.1-201ENST00000615828 501 ntBASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 AC073968.1-201ENST00000618594 637 ntBASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 MIR6861-201ENST00000618657 64 ntBASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 AC018816.2-201ENST00000621460 353 ntBASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 AL359740.1-201ENST00000624340 592 ntBASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 SNORA17.5-201ENST00000630429 132 ntBASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 MIR6715B-201ENST00000637172 77 ntBASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.58□□□□□ -1.68
PTCHD4Q6ZW05 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms