Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 FTH1P9-201ENST00000513251 355 ntBASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 MRPS16P1-201ENST00000523462 412 ntBASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 AP001804.3-201ENST00000525146 880 ntBASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 AC068831.4-201ENST00000556118 109 ntBASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 AC026826.3-201ENST00000561747 158 ntBASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 MIR548Y-201ENST00000582739 110 ntBASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 AP001029.3-201ENST00000588063 596 ntBASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 AC018889.1-201ENST00000605372 397 ntBASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 AC018462.2-201ENST00000605375 395 ntBASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 BX664608.1-201ENST00000610519 487 ntBASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 AC090017.1-201ENST00000548612 1779 ntBASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 RNU6-1188P-201ENST00000363795 107 ntBASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 RNU6-108P-201ENST00000365558 107 ntBASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 MIR548M-201ENST00000408260 86 ntBASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 RNU4-26P-201ENST00000410270 107 ntBASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 U3.43-201ENST00000410734 213 ntBASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 AL357752.1-201ENST00000412817 349 ntBASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 HNRNPDLP1-201ENST00000412834 550 ntBASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 RGS17P1-201ENST00000423358 553 ntBASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 GAPDHP59-201ENST00000435908 267 ntBASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 PCNPP5-201ENST00000452246 481 ntBASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 RPS20P21-201ENST00000466859 343 ntBASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 AC111193.1-201ENST00000504097 155 ntBASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 AC091965.3-201ENST00000506236 208 ntBASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 AC093870.1-201ENST00000506837 213 ntBASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 OR4D12P-201ENST00000509361 911 ntBASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 RNU6-201P-201ENST00000517100 61 ntBASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 HMGB1P19-201ENST00000517578 577 ntBASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 OR4R1P-201ENST00000529879 463 ntBASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 AL592436.1-201ENST00000605135 558 ntBASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 AC062037.2-201ENST00000610137 73 ntBASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 uc_338.11-201ENST00000619132 160 ntBASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 MRPL57P1-201ENST00000621486 265 ntBASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 AC091953.2-201ENST00000623979 160 ntBASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 ZNF734P-201ENST00000419494 1534 ntBASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 AC004076.2-201ENST00000620532 3323 ntBASIC6.43□□□□□ -1.38
FOXR1Q6PIV2 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
FOXR1Q6PIV2 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
FOXR1Q6PIV2 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.42□□□□□ -1.38
FOXR1Q6PIV2 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
FOXR1Q6PIV2 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.42□□□□□ -1.38
FOXR1Q6PIV2 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
FOXR1Q6PIV2 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
FOXR1Q6PIV2 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.42□□□□□ -1.38
FOXR1Q6PIV2 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
FOXR1Q6PIV2 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
FOXR1Q6PIV2 Y_RNA.100-201ENST00000363141 102 ntBASIC6.42□□□□□ -1.38
FOXR1Q6PIV2 RNU6-532P-201ENST00000384318 107 ntBASIC6.42□□□□□ -1.38
FOXR1Q6PIV2 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
FOXR1Q6PIV2 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
FOXR1Q6PIV2 TMSB4XP8-201ENST00000402089 135 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms