Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.65□□□□□ -1.83
TMEM53Q6P2H8 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.65□□□□□ -1.83
TMEM53Q6P2H8 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.65□□□□□ -1.83
TMEM53Q6P2H8 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TMEM53Q6P2H8 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.65□□□□□ -1.83
TMEM53Q6P2H8 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TMEM53Q6P2H8 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
TMEM53Q6P2H8 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TMEM53Q6P2H8 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.65□□□□□ -1.83
TMEM53Q6P2H8 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
TMEM53Q6P2H8 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TMEM53Q6P2H8 LARP1BP1-201ENST00000506036 1359 ntBASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 SNORA62-201ENST00000365493 153 ntBASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 MIR141-201ENST00000384975 95 ntBASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 RPS15AP40-201ENST00000419621 391 ntBASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 VDAC1P6-201ENST00000430062 855 ntBASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 NUTF2P3-201ENST00000448540 384 ntBASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 AC009220.1-201ENST00000451614 275 ntBASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 OR9N1P-202ENST00000494289 481 ntBASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 RPL29P14-201ENST00000495837 428 ntBASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 ARL2BPP6-201ENST00000512757 439 ntBASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 SNORA31.9-201ENST00000516429 84 ntBASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 OR5D17P-201ENST00000531492 978 ntBASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 OR6C73P-201ENST00000546432 358 ntBASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 MIR3939-201ENST00000582614 106 ntBASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 KPNA2P3-201ENST00000584190 848 ntBASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 AC011492.1-201ENST00000600023 315 ntBASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 NTAN1P1-201ENST00000603150 646 ntBASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 AC011374.2-201ENST00000607135 526 ntBASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 AC099778.2-201ENST00000610904 211 ntBASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 AC095038.2-201ENST00000621464 1070 ntBASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 SNORA50A-202ENST00000629536 136 ntBASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TMEM53Q6P2H8 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 AL079305.1-201ENST00000623159 3008 ntBASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 AP002001.2-201ENST00000529025 1469 ntBASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 MIR591-201ENST00000385290 95 ntBASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 MIR1303-201ENST00000408625 86 ntBASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 LIPT1P1-201ENST00000415870 1186 ntBASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 AC017079.2-201ENST00000416102 485 ntBASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 CHIAP3-201ENST00000423668 1133 ntBASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 C4BPAP2-201ENST00000428434 478 ntBASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 RPS29P31-201ENST00000446147 164 ntBASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 HMGB1P48-201ENST00000446155 598 ntBASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 TPT1P12-201ENST00000448968 492 ntBASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 RNA5SP246-201ENST00000458909 119 ntBASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 RPL38P1-201ENST00000460914 211 ntBASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 RPS23P7-201ENST00000466210 444 ntBASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 RPL7P1-201ENST00000468161 747 ntBASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 RPL7P9-201ENST00000468715 747 ntBASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 AC093755.1-201ENST00000512950 1023 ntBASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 AC008494.2-201ENST00000514544 370 ntBASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 RN7SKP277-201ENST00000516895 283 ntBASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 RN7SKP283-201ENST00000517197 270 ntBASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 SOD1P3-201ENST00000518682 454 ntBASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 AP003730.1-201ENST00000524605 285 ntBASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 HIGD1AP5-201ENST00000529959 259 ntBASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.63□□□□□ -1.83
TMEM53Q6P2H8 EIF1P6-201ENST00000600054 334 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms