Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 RPL21P103-201ENST00000479921 488 ntBASIC3.2□□□□□ -1.9
CCDC58Q4VC31 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.2□□□□□ -1.9
CCDC58Q4VC31 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC58Q4VC31 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC58Q4VC31 MRPL49P2-201ENST00000521066 465 ntBASIC3.2□□□□□ -1.9
CCDC58Q4VC31 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC58Q4VC31 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC58Q4VC31 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.2□□□□□ -1.9
CCDC58Q4VC31 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.2□□□□□ -1.9
CCDC58Q4VC31 AC120057.2-201ENST00000571520 271 ntBASIC3.2□□□□□ -1.9
CCDC58Q4VC31 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC58Q4VC31 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CCDC58Q4VC31 AC022149.2-201ENST00000621061 203 ntBASIC3.2□□□□□ -1.9
CCDC58Q4VC31 MIR6500-201ENST00000622700 86 ntBASIC3.2□□□□□ -1.9
CCDC58Q4VC31 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC58Q4VC31 AC110774.1-201ENST00000623567 2018 ntBASIC3.2□□□□□ -1.9
CCDC58Q4VC31 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC58Q4VC31 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC58Q4VC31 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC58Q4VC31 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC58Q4VC31 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CCDC58Q4VC31 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC58Q4VC31 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC58Q4VC31 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC58Q4VC31 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC58Q4VC31 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC58Q4VC31 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CCDC58Q4VC31 RNU6-213P-201ENST00000384051 104 ntBASIC3.19□□□□□ -1.9
CCDC58Q4VC31 SAR1AP2-201ENST00000392696 594 ntBASIC3.19□□□□□ -1.9
CCDC58Q4VC31 RCC2P2-201ENST00000422174 918 ntBASIC3.19□□□□□ -1.9
CCDC58Q4VC31 SDCBPP2-201ENST00000424643 885 ntBASIC3.19□□□□□ -1.9
CCDC58Q4VC31 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC58Q4VC31 GOT2P5-201ENST00000433995 546 ntBASIC3.19□□□□□ -1.9
CCDC58Q4VC31 B3GNT2P1-201ENST00000434960 952 ntBASIC3.19□□□□□ -1.9
CCDC58Q4VC31 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC58Q4VC31 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC58Q4VC31 RPS3AP46-201ENST00000448352 682 ntBASIC3.19□□□□□ -1.9
CCDC58Q4VC31 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC58Q4VC31 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC58Q4VC31 OR9M1P-201ENST00000459641 921 ntBASIC3.19□□□□□ -1.9
CCDC58Q4VC31 AC005726.1-201ENST00000494679 427 ntBASIC3.19□□□□□ -1.9
CCDC58Q4VC31 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC58Q4VC31 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC58Q4VC31 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC58Q4VC31 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.19□□□□□ -1.9
CCDC58Q4VC31 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC58Q4VC31 RN7SKP282-201ENST00000516824 299 ntBASIC3.19□□□□□ -1.9
CCDC58Q4VC31 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC58Q4VC31 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.19□□□□□ -1.9
CCDC58Q4VC31 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC58Q4VC31 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC58Q4VC31 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.19□□□□□ -1.9
CCDC58Q4VC31 CYCSP30-201ENST00000546447 172 ntBASIC3.19□□□□□ -1.9
CCDC58Q4VC31 SYF2P1-201ENST00000550658 413 ntBASIC3.19□□□□□ -1.9
CCDC58Q4VC31 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC58Q4VC31 AL606490.9-201ENST00000603331 271 ntBASIC3.19□□□□□ -1.9
CCDC58Q4VC31 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC58Q4VC31 MIR6867-201ENST00000610636 67 ntBASIC3.19□□□□□ -1.9
CCDC58Q4VC31 AC006065.5-201ENST00000623427 349 ntBASIC3.19□□□□□ -1.9
CCDC58Q4VC31 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC58Q4VC31 API5P2-201ENST00000397055 1498 ntBASIC3.19□□□□□ -1.9
CCDC58Q4VC31 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC58Q4VC31 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC58Q4VC31 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC58Q4VC31 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC58Q4VC31 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC58Q4VC31 SNORA62-201ENST00000365493 153 ntBASIC3.18□□□□□ -1.9
CCDC58Q4VC31 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC58Q4VC31 AL022722.2-201ENST00000402519 180 ntBASIC3.18□□□□□ -1.9
CCDC58Q4VC31 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC58Q4VC31 RPL21P65-201ENST00000406094 466 ntBASIC3.18□□□□□ -1.9
CCDC58Q4VC31 AL031121.1-201ENST00000406553 254 ntBASIC3.18□□□□□ -1.9
CCDC58Q4VC31 RN7SKP123-201ENST00000410732 291 ntBASIC3.18□□□□□ -1.9
CCDC58Q4VC31 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC58Q4VC31 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC58Q4VC31 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC58Q4VC31 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC58Q4VC31 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC58Q4VC31 HMGN2P20-201ENST00000437531 273 ntBASIC3.18□□□□□ -1.9
CCDC58Q4VC31 CACYBPP1-201ENST00000438592 684 ntBASIC3.18□□□□□ -1.9
CCDC58Q4VC31 NPM1P49-201ENST00000448027 714 ntBASIC3.18□□□□□ -1.9
CCDC58Q4VC31 PPIAP3-201ENST00000450588 505 ntBASIC3.18□□□□□ -1.9
CCDC58Q4VC31 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC58Q4VC31 RPS29P33-201ENST00000456717 146 ntBASIC3.18□□□□□ -1.9
CCDC58Q4VC31 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC58Q4VC31 RPS15AP1-201ENST00000457423 391 ntBASIC3.18□□□□□ -1.9
CCDC58Q4VC31 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC58Q4VC31 RPL21P8-201ENST00000465083 535 ntBASIC3.18□□□□□ -1.9
CCDC58Q4VC31 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC58Q4VC31 AC023598.1-201ENST00000472521 361 ntBASIC3.18□□□□□ -1.9
CCDC58Q4VC31 AC084357.1-201ENST00000473404 255 ntBASIC3.18□□□□□ -1.9
CCDC58Q4VC31 AC021205.2-201ENST00000480069 347 ntBASIC3.18□□□□□ -1.9
CCDC58Q4VC31 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC58Q4VC31 ATG10-AS1-201ENST00000504846 648 ntBASIC3.18□□□□□ -1.9
CCDC58Q4VC31 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.18□□□□□ -1.9
CCDC58Q4VC31 SNORA31.26-201ENST00000517250 137 ntBASIC3.18□□□□□ -1.9
CCDC58Q4VC31 SOD1P3-201ENST00000518682 454 ntBASIC3.18□□□□□ -1.9
CCDC58Q4VC31 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC58Q4VC31 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.18□□□□□ -1.9
CCDC58Q4VC31 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms