Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
RFX4Q33E94 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RFX4Q33E94 CASC19-261ENST00000641853 1638 ntBASIC3.51□□□□□ -1.85
RFX4Q33E94 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RFX4Q33E94 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.51□□□□□ -1.85
RFX4Q33E94 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.51□□□□□ -1.85
RFX4Q33E94 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
RFX4Q33E94 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RFX4Q33E94 RIOK3P1-201ENST00000418778 1528 ntBASIC3.5□□□□□ -1.85
RFX4Q33E94 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
RFX4Q33E94 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.5□□□□□ -1.85
RFX4Q33E94 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RFX4Q33E94 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.5□□□□□ -1.85
RFX4Q33E94 TAF9BP2-201ENST00000400856 499 ntBASIC3.5□□□□□ -1.85
RFX4Q33E94 SNORA11B-201ENST00000408175 129 ntBASIC3.5□□□□□ -1.85
RFX4Q33E94 LIPT1P1-201ENST00000415870 1186 ntBASIC3.5□□□□□ -1.85
RFX4Q33E94 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.5□□□□□ -1.85
RFX4Q33E94 MTCO3P4-201ENST00000419236 787 ntBASIC3.5□□□□□ -1.85
RFX4Q33E94 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.5□□□□□ -1.85
RFX4Q33E94 PTP4A1P5-201ENST00000420305 455 ntBASIC3.5□□□□□ -1.85
RFX4Q33E94 RPL31P12-201ENST00000422587 358 ntBASIC3.5□□□□□ -1.85
RFX4Q33E94 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.5□□□□□ -1.85
RFX4Q33E94 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.5□□□□□ -1.85
RFX4Q33E94 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.5□□□□□ -1.85
RFX4Q33E94 NUTF2P3-201ENST00000448540 384 ntBASIC3.5□□□□□ -1.85
RFX4Q33E94 AC099563.1-201ENST00000456086 418 ntBASIC3.5□□□□□ -1.85
RFX4Q33E94 HMGN2P7-201ENST00000456186 273 ntBASIC3.5□□□□□ -1.85
RFX4Q33E94 RPS3AP6-201ENST00000484430 795 ntBASIC3.5□□□□□ -1.85
RFX4Q33E94 RPS3AP50-201ENST00000487064 803 ntBASIC3.5□□□□□ -1.85
RFX4Q33E94 HMGB1P21-201ENST00000502313 581 ntBASIC3.5□□□□□ -1.85
RFX4Q33E94 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.5□□□□□ -1.85
RFX4Q33E94 COL6A4P2-205ENST00000509855 506 ntBASIC3.5□□□□□ -1.85
RFX4Q33E94 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.5□□□□□ -1.85
RFX4Q33E94 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.5□□□□□ -1.85
RFX4Q33E94 SNORA31.13-201ENST00000516624 135 ntBASIC3.5□□□□□ -1.85
RFX4Q33E94 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.5□□□□□ -1.85
RFX4Q33E94 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.5□□□□□ -1.85
RFX4Q33E94 AC138701.1-201ENST00000524329 714 ntBASIC3.5□□□□□ -1.85
RFX4Q33E94 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
RFX4Q33E94 OR5AP1P-201ENST00000529730 940 ntBASIC3.5□□□□□ -1.85
RFX4Q33E94 AP003168.1-201ENST00000530091 307 ntBASIC3.5□□□□□ -1.85
RFX4Q33E94 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RFX4Q33E94 TGIF1P1-201ENST00000558095 802 ntBASIC3.5□□□□□ -1.85
RFX4Q33E94 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.5□□□□□ -1.85
RFX4Q33E94 AC233266.2-201ENST00000567067 528 ntBASIC3.5□□□□□ -1.85
RFX4Q33E94 MIR3186-201ENST00000577404 85 ntBASIC3.5□□□□□ -1.85
RFX4Q33E94 AC023575.1-201ENST00000580510 358 ntBASIC3.5□□□□□ -1.85
RFX4Q33E94 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.5□□□□□ -1.85
RFX4Q33E94 NF1P5-201ENST00000588287 448 ntBASIC3.5□□□□□ -1.85
RFX4Q33E94 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.5□□□□□ -1.85
RFX4Q33E94 AL355816.1-201ENST00000607951 118 ntBASIC3.5□□□□□ -1.85
RFX4Q33E94 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.5□□□□□ -1.85
RFX4Q33E94 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.5□□□□□ -1.85
RFX4Q33E94 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.5□□□□□ -1.85
RFX4Q33E94 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RFX4Q33E94 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RFX4Q33E94 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
RFX4Q33E94 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.5□□□□□ -1.85
RFX4Q33E94 ZNF90P1-201ENST00000480493 1951 ntBASIC3.49□□□□□ -1.85
RFX4Q33E94 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
RFX4Q33E94 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.49□□□□□ -1.85
RFX4Q33E94 U1.1-201ENST00000384101 164 ntBASIC3.49□□□□□ -1.85
RFX4Q33E94 AL590704.1-201ENST00000402856 794 ntBASIC3.49□□□□□ -1.85
RFX4Q33E94 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.49□□□□□ -1.85
RFX4Q33E94 XKRYP4-201ENST00000414395 483 ntBASIC3.49□□□□□ -1.85
RFX4Q33E94 AC019070.1-201ENST00000415008 1024 ntBASIC3.49□□□□□ -1.85
RFX4Q33E94 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RFX4Q33E94 AC073508.1-201ENST00000428866 656 ntBASIC3.49□□□□□ -1.85
RFX4Q33E94 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
RFX4Q33E94 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RFX4Q33E94 TBCAP1-201ENST00000436520 327 ntBASIC3.49□□□□□ -1.85
RFX4Q33E94 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.49□□□□□ -1.85
RFX4Q33E94 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.49□□□□□ -1.85
RFX4Q33E94 RPL34P26-201ENST00000445636 354 ntBASIC3.49□□□□□ -1.85
RFX4Q33E94 XKRYP5-201ENST00000449659 483 ntBASIC3.49□□□□□ -1.85
RFX4Q33E94 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.49□□□□□ -1.85
RFX4Q33E94 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.49□□□□□ -1.85
RFX4Q33E94 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.49□□□□□ -1.85
RFX4Q33E94 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.49□□□□□ -1.85
RFX4Q33E94 PDCL2P2-201ENST00000533651 189 ntBASIC3.49□□□□□ -1.85
RFX4Q33E94 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.49□□□□□ -1.85
RFX4Q33E94 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.49□□□□□ -1.85
RFX4Q33E94 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.49□□□□□ -1.85
RFX4Q33E94 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.49□□□□□ -1.85
RFX4Q33E94 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.49□□□□□ -1.85
RFX4Q33E94 AC006960.3-201ENST00000561845 705 ntBASIC3.49□□□□□ -1.85
RFX4Q33E94 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.49□□□□□ -1.85
RFX4Q33E94 MIR5047-201ENST00000579212 100 ntBASIC3.49□□□□□ -1.85
RFX4Q33E94 KPNA2P3-201ENST00000584190 848 ntBASIC3.49□□□□□ -1.85
RFX4Q33E94 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.49□□□□□ -1.85
RFX4Q33E94 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.49□□□□□ -1.85
RFX4Q33E94 AP003117.2-201ENST00000606010 545 ntBASIC3.49□□□□□ -1.85
RFX4Q33E94 AL354760.1-201ENST00000608357 643 ntBASIC3.49□□□□□ -1.85
RFX4Q33E94 AC110792.4-201ENST00000609843 298 ntBASIC3.49□□□□□ -1.85
RFX4Q33E94 AC008121.2-201ENST00000614647 523 ntBASIC3.49□□□□□ -1.85
RFX4Q33E94 MIR1264-201ENST00000616374 69 ntBASIC3.49□□□□□ -1.85
RFX4Q33E94 AC020923.1-201ENST00000624021 917 ntBASIC3.49□□□□□ -1.85
RFX4Q33E94 FRG1DP-201ENST00000635586 771 ntBASIC3.49□□□□□ -1.85
RFX4Q33E94 AC091948.2-201ENST00000636510 279 ntBASIC3.49□□□□□ -1.85
RFX4Q33E94 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms