Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
HIST1H1AQ02539 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
HIST1H1AQ02539 RNA5SP293-201ENST00000410527 113 ntBASIC2.81□□□□□ -1.96
HIST1H1AQ02539 RNU6-55P-201ENST00000411092 107 ntBASIC2.81□□□□□ -1.96
HIST1H1AQ02539 RNU6-954P-201ENST00000411355 107 ntBASIC2.81□□□□□ -1.96
HIST1H1AQ02539 RPL31P2-201ENST00000413849 377 ntBASIC2.81□□□□□ -1.96
HIST1H1AQ02539 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC2.81□□□□□ -1.96
HIST1H1AQ02539 HMGB3P20-201ENST00000417997 600 ntBASIC2.81□□□□□ -1.96
HIST1H1AQ02539 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC2.81□□□□□ -1.96
HIST1H1AQ02539 AL117339.2-201ENST00000430475 180 ntBASIC2.81□□□□□ -1.96
HIST1H1AQ02539 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC2.81□□□□□ -1.96
HIST1H1AQ02539 AC093716.1-201ENST00000435923 377 ntBASIC2.81□□□□□ -1.96
HIST1H1AQ02539 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC2.81□□□□□ -1.96
HIST1H1AQ02539 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC2.81□□□□□ -1.96
HIST1H1AQ02539 AC099563.1-201ENST00000456086 418 ntBASIC2.81□□□□□ -1.96
HIST1H1AQ02539 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC2.81□□□□□ -1.96
HIST1H1AQ02539 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC2.81□□□□□ -1.96
HIST1H1AQ02539 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC2.81□□□□□ -1.96
HIST1H1AQ02539 OR9M1P-201ENST00000459641 921 ntBASIC2.81□□□□□ -1.96
HIST1H1AQ02539 FPGT-203ENST00000467578 601 ntTSL 2 BASIC2.81□□□□□ -1.96
HIST1H1AQ02539 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.81□□□□□ -1.96
HIST1H1AQ02539 FTH1P21-201ENST00000512179 511 ntBASIC2.81□□□□□ -1.96
HIST1H1AQ02539 MIR2116-201ENST00000517221 80 ntBASIC2.81□□□□□ -1.96
HIST1H1AQ02539 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC2.81□□□□□ -1.96
HIST1H1AQ02539 PTS-202ENST00000524931 696 ntTSL 3 BASIC2.81□□□□□ -1.96
HIST1H1AQ02539 AC006960.3-201ENST00000561845 705 ntBASIC2.81□□□□□ -1.96
HIST1H1AQ02539 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC2.81□□□□□ -1.96
HIST1H1AQ02539 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.81□□□□□ -1.96
HIST1H1AQ02539 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC2.81□□□□□ -1.96
HIST1H1AQ02539 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC2.81□□□□□ -1.96
HIST1H1AQ02539 AC139769.3-201ENST00000618383 175 ntBASIC2.81□□□□□ -1.96
HIST1H1AQ02539 AC105105.5-201ENST00000622635 1294 ntBASIC2.81□□□□□ -1.96
HIST1H1AQ02539 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC2.81□□□□□ -1.96
HIST1H1AQ02539 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HIST1H1AQ02539 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC2.81□□□□□ -1.96
HIST1H1AQ02539 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
HIST1H1AQ02539 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HIST1H1AQ02539 RNF6P1-201ENST00000444889 1784 ntBASIC2.81□□□□□ -1.96
HIST1H1AQ02539 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.81□□□□□ -1.96
HIST1H1AQ02539 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.81□□□□□ -1.96
HIST1H1AQ02539 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
HIST1H1AQ02539 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HIST1H1AQ02539 ZNF33CP-201ENST00000432492 2030 ntBASIC2.8□□□□□ -1.96
HIST1H1AQ02539 AL157700.1-201ENST00000561973 1432 ntBASIC2.8□□□□□ -1.96
HIST1H1AQ02539 OR4A15-201ENST00000314706 1035 ntBASIC2.8□□□□□ -1.96
HIST1H1AQ02539 AC126755.2-208ENST00000327792 462 ntBASIC2.8□□□□□ -1.96
HIST1H1AQ02539 AC138969.1-213ENST00000331436 462 ntBASIC2.8□□□□□ -1.96
HIST1H1AQ02539 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HIST1H1AQ02539 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
HIST1H1AQ02539 RNA5SP424-201ENST00000390988 115 ntBASIC2.8□□□□□ -1.96
HIST1H1AQ02539 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC2.8□□□□□ -1.96
HIST1H1AQ02539 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC2.8□□□□□ -1.96
HIST1H1AQ02539 AL691447.1-201ENST00000419456 387 ntBASIC2.8□□□□□ -1.96
HIST1H1AQ02539 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.8□□□□□ -1.96
HIST1H1AQ02539 OR8F1P-201ENST00000425243 930 ntBASIC2.8□□□□□ -1.96
HIST1H1AQ02539 AC125238.1-201ENST00000448842 249 ntBASIC2.8□□□□□ -1.96
HIST1H1AQ02539 TPT1P12-201ENST00000448968 492 ntBASIC2.8□□□□□ -1.96
HIST1H1AQ02539 AC009220.1-201ENST00000451614 275 ntBASIC2.8□□□□□ -1.96
HIST1H1AQ02539 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC2.8□□□□□ -1.96
HIST1H1AQ02539 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC2.8□□□□□ -1.96
HIST1H1AQ02539 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.8□□□□□ -1.96
HIST1H1AQ02539 RN7SL442P-201ENST00000473804 320 ntBASIC2.8□□□□□ -1.96
HIST1H1AQ02539 NPM1P17-201ENST00000479221 602 ntBASIC2.8□□□□□ -1.96
HIST1H1AQ02539 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC2.8□□□□□ -1.96
HIST1H1AQ02539 RN7SL323P-201ENST00000494712 295 ntBASIC2.8□□□□□ -1.96
HIST1H1AQ02539 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC2.8□□□□□ -1.96
HIST1H1AQ02539 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC2.8□□□□□ -1.96
HIST1H1AQ02539 AC110768.1-201ENST00000509222 400 ntBASIC2.8□□□□□ -1.96
HIST1H1AQ02539 RNA5SP380-201ENST00000517190 98 ntBASIC2.8□□□□□ -1.96
HIST1H1AQ02539 NPM1P52-201ENST00000518264 846 ntBASIC2.8□□□□□ -1.96
HIST1H1AQ02539 SOD1P3-201ENST00000518682 454 ntBASIC2.8□□□□□ -1.96
HIST1H1AQ02539 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC2.8□□□□□ -1.96
HIST1H1AQ02539 MTCO1P49-201ENST00000523429 802 ntBASIC2.8□□□□□ -1.96
HIST1H1AQ02539 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.8□□□□□ -1.96
HIST1H1AQ02539 TRAV15-201ENST00000556680 249 ntBASIC2.8□□□□□ -1.96
HIST1H1AQ02539 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
HIST1H1AQ02539 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC2.8□□□□□ -1.96
HIST1H1AQ02539 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC2.8□□□□□ -1.96
HIST1H1AQ02539 AC007620.3-201ENST00000608131 497 ntBASIC2.8□□□□□ -1.96
HIST1H1AQ02539 BX323046.1-201ENST00000610145 535 ntBASIC2.8□□□□□ -1.96
HIST1H1AQ02539 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC2.8□□□□□ -1.96
HIST1H1AQ02539 AC005344.1-201ENST00000613391 459 ntBASIC2.8□□□□□ -1.96
HIST1H1AQ02539 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
HIST1H1AQ02539 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
HIST1H1AQ02539 AC058791.1-201ENST00000608412 3198 ntBASIC2.8□□□□□ -1.96
HIST1H1AQ02539 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HIST1H1AQ02539 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
HIST1H1AQ02539 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HIST1H1AQ02539 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
HIST1H1AQ02539 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC2.79□□□□□ -1.96
HIST1H1AQ02539 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HIST1H1AQ02539 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
HIST1H1AQ02539 MIR372-201ENST00000362225 67 ntBASIC2.79□□□□□ -1.96
HIST1H1AQ02539 RNU6-283P-201ENST00000364788 107 ntBASIC2.79□□□□□ -1.96
HIST1H1AQ02539 RNU1-13P-201ENST00000384499 162 ntBASIC2.79□□□□□ -1.96
HIST1H1AQ02539 MIR141-201ENST00000384975 95 ntBASIC2.79□□□□□ -1.96
HIST1H1AQ02539 RPS7P13-201ENST00000413955 498 ntBASIC2.79□□□□□ -1.96
HIST1H1AQ02539 COX6CP17-201ENST00000421389 185 ntBASIC2.79□□□□□ -1.96
HIST1H1AQ02539 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC2.79□□□□□ -1.96
HIST1H1AQ02539 AL390879.2-203ENST00000426943 1121 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms