Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
HSPG2P98160 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
HSPG2P98160 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.09
HSPG2P98160 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
HSPG2P98160 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
HSPG2P98160 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
HSPG2P98160 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
HSPG2P98160 MTND2P11-201ENST00000423638 648 ntBASIC2.03□□□□□ -2.09
HSPG2P98160 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.03□□□□□ -2.09
HSPG2P98160 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC2.03□□□□□ -2.09
HSPG2P98160 AC234778.2-201ENST00000566241 354 ntBASIC2.03□□□□□ -2.09
HSPG2P98160 MIR4435-1-201ENST00000582552 80 ntBASIC2.03□□□□□ -2.09
HSPG2P98160 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.03□□□□□ -2.09
HSPG2P98160 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.02□□□□□ -2.09
HSPG2P98160 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HSPG2P98160 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
HSPG2P98160 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HSPG2P98160 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
HSPG2P98160 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC2.02□□□□□ -2.09
HSPG2P98160 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HSPG2P98160 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
HSPG2P98160 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC2.02□□□□□ -2.09
HSPG2P98160 U3.23-201ENST00000391132 200 ntBASIC2.02□□□□□ -2.09
HSPG2P98160 SMC4P1-201ENST00000414479 527 ntBASIC2.02□□□□□ -2.09
HSPG2P98160 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC2.02□□□□□ -2.09
HSPG2P98160 AC098824.1-201ENST00000453565 980 ntBASIC2.02□□□□□ -2.09
HSPG2P98160 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC2.02□□□□□ -2.09
HSPG2P98160 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.02□□□□□ -2.09
HSPG2P98160 AP002404.1-201ENST00000532005 451 ntBASIC2.02□□□□□ -2.09
HSPG2P98160 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.02□□□□□ -2.09
HSPG2P98160 HMGB1P6-201ENST00000569046 646 ntBASIC2.02□□□□□ -2.09
HSPG2P98160 UBL5P2-201ENST00000583788 219 ntBASIC2.02□□□□□ -2.09
HSPG2P98160 LSM1P2-201ENST00000604911 322 ntBASIC2.02□□□□□ -2.09
HSPG2P98160 AC006946.3-201ENST00000609791 756 ntBASIC2.02□□□□□ -2.09
HSPG2P98160 AP004607.9-201ENST00000618202 316 ntBASIC2.02□□□□□ -2.09
HSPG2P98160 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HSPG2P98160 FAM35BP-202ENST00000497389 3337 ntBASIC2.02□□□□□ -2.09
HSPG2P98160 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HSPG2P98160 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HSPG2P98160 RNU1-108P-201ENST00000362556 161 ntBASIC2.02□□□□□ -2.09
HSPG2P98160 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.02□□□□□ -2.09
HSPG2P98160 AC022018.1-201ENST00000430685 241 ntBASIC2.02□□□□□ -2.09
HSPG2P98160 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.02□□□□□ -2.09
HSPG2P98160 HCG17-214ENST00000453558 732 ntTSL 5 BASIC2.02□□□□□ -2.09
HSPG2P98160 SNORD109B-201ENST00000458961 67 ntBASIC2.02□□□□□ -2.09
HSPG2P98160 SNORD109A-201ENST00000459128 67 ntBASIC2.02□□□□□ -2.09
HSPG2P98160 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HSPG2P98160 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC2.02□□□□□ -2.09
HSPG2P98160 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC2.02□□□□□ -2.09
HSPG2P98160 AC018552.3-201ENST00000567416 561 ntBASIC2.02□□□□□ -2.09
HSPG2P98160 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.02□□□□□ -2.09
HSPG2P98160 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
HSPG2P98160 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HSPG2P98160 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HSPG2P98160 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HSPG2P98160 CR383658.2-201ENST00000547576 1525 ntBASIC2.02□□□□□ -2.09
HSPG2P98160 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HSPG2P98160 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
HSPG2P98160 AL445529.1-201ENST00000398713 389 ntBASIC2.02□□□□□ -2.09
HSPG2P98160 AL353692.2-201ENST00000407054 335 ntBASIC2.02□□□□□ -2.09
HSPG2P98160 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.02□□□□□ -2.09
HSPG2P98160 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.02□□□□□ -2.09
HSPG2P98160 RPS4XP6-201ENST00000477670 797 ntBASIC2.02□□□□□ -2.09
HSPG2P98160 RN7SL20P-201ENST00000488827 297 ntBASIC2.02□□□□□ -2.09
HSPG2P98160 AC068020.1-201ENST00000594215 661 ntBASIC2.02□□□□□ -2.09
HSPG2P98160 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HSPG2P98160 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HSPG2P98160 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HSPG2P98160 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HSPG2P98160 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HSPG2P98160 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
HSPG2P98160 MAPK10-362ENST00000641864 4484 ntBASIC2.01□□□□□ -2.09
HSPG2P98160 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
HSPG2P98160 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC2.01□□□□□ -2.09
HSPG2P98160 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC2.01□□□□□ -2.09
HSPG2P98160 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.01□□□□□ -2.09
HSPG2P98160 AC108022.1-201ENST00000493466 478 ntBASIC2.01□□□□□ -2.09
HSPG2P98160 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.01□□□□□ -2.09
HSPG2P98160 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.01□□□□□ -2.09
HSPG2P98160 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC2.01□□□□□ -2.09
HSPG2P98160 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC2.01□□□□□ -2.09
HSPG2P98160 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HSPG2P98160 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC2.01□□□□□ -2.09
HSPG2P98160 YES1-203ENST00000577961 4554 ntTSL 5 BASIC2.01□□□□□ -2.09
HSPG2P98160 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
HSPG2P98160 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.01□□□□□ -2.09
HSPG2P98160 AC069540.1-201ENST00000446320 988 ntBASIC2.01□□□□□ -2.09
HSPG2P98160 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC2.01□□□□□ -2.09
HSPG2P98160 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC2.01□□□□□ -2.09
HSPG2P98160 HIGD1AP1-201ENST00000550979 275 ntBASIC2.01□□□□□ -2.09
HSPG2P98160 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC2.01□□□□□ -2.09
HSPG2P98160 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.01□□□□□ -2.09
HSPG2P98160 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC2.01□□□□□ -2.09
HSPG2P98160 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
HSPG2P98160 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC2.01□□□□□ -2.09
HSPG2P98160 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HSPG2P98160 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC2.01□□□□□ -2.09
HSPG2P98160 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
HSPG2P98160 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
HSPG2P98160 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms