Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NKX6-1P78426 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.76□□□□□ -1.65
NKX6-1P78426 RN7SKP145-201ENST00000363291 303 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 RNU5E-5P-201ENST00000365379 116 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 Y_RNA.359-201ENST00000365498 102 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.76□□□□□ -1.65
NKX6-1P78426 SNORA70.6-201ENST00000383934 134 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 OR6C69P-201ENST00000394268 893 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 AL512430.2-201ENST00000406786 339 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 RPL31P2-201ENST00000413849 377 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.76□□□□□ -1.65
NKX6-1P78426 COX6CP17-201ENST00000421389 185 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.76□□□□□ -1.65
NKX6-1P78426 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NKX6-1P78426 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.76□□□□□ -1.65
NKX6-1P78426 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.76□□□□□ -1.65
NKX6-1P78426 USP9YP28-201ENST00000435142 589 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 MTND1P28-201ENST00000435623 950 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 SKP1P1-201ENST00000438081 489 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 RPS24P1-201ENST00000438550 371 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 Z80107.2-201ENST00000445127 392 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 PDSS1P2-201ENST00000449397 678 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 MTND1P27-201ENST00000451117 902 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 HMGB3P21-201ENST00000452483 547 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 RPL31P50-201ENST00000471002 296 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 AL136126.1-201ENST00000473603 402 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 AC104563.1-201ENST00000476147 376 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 AC109462.1-201ENST00000491087 368 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.76□□□□□ -1.65
NKX6-1P78426 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.76□□□□□ -1.65
NKX6-1P78426 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.76□□□□□ -1.65
NKX6-1P78426 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.76□□□□□ -1.65
NKX6-1P78426 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.76□□□□□ -1.65
NKX6-1P78426 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NKX6-1P78426 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.76□□□□□ -1.65
NKX6-1P78426 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.76□□□□□ -1.65
NKX6-1P78426 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 AP002453.2-201ENST00000533503 320 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 AC122688.1-201ENST00000541494 223 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.76□□□□□ -1.65
NKX6-1P78426 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.76□□□□□ -1.65
NKX6-1P78426 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.76□□□□□ -1.65
NKX6-1P78426 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.76□□□□□ -1.65
NKX6-1P78426 OR1F2P-201ENST00000570470 933 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC4.76□□□□□ -1.65
NKX6-1P78426 MIR4472-2-201ENST00000582069 67 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 AP001180.3-201ENST00000582221 145 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 ZNF415P1-201ENST00000582279 1166 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 MIR544B-201ENST00000582372 78 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 MIR548AB-201ENST00000584917 84 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 AC005771.1-201ENST00000585581 349 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
NKX6-1P78426 DEFB131E-202ENST00000602581 683 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 AC010857.1-201ENST00000606398 594 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.76□□□□□ -1.65
NKX6-1P78426 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 AP002799.1-201ENST00000623552 423 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 AL596275.2-204ENST00000641628 552 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 AL596275.2-206ENST00000641957 626 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
NKX6-1P78426 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
NKX6-1P78426 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NKX6-1P78426 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NKX6-1P78426 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 AC092376.2-201ENST00000622621 4116 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
NKX6-1P78426 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
NKX6-1P78426 ASNSP1-201ENST00000518311 1939 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
NKX6-1P78426 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.75□□□□□ -1.65
NKX6-1P78426 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NKX6-1P78426 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.75□□□□□ -1.65
NKX6-1P78426 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
NKX6-1P78426 Z95327.2-201ENST00000414579 1873 ntBASIC4.75□□□□□ -1.65
NKX6-1P78426 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NKX6-1P78426 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NKX6-1P78426 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
NKX6-1P78426 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NKX6-1P78426 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NKX6-1P78426 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NKX6-1P78426 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
NKX6-1P78426 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
NKX6-1P78426 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
NKX6-1P78426 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NKX6-1P78426 RN7SKP185-201ENST00000362813 326 ntBASIC4.75□□□□□ -1.65
NKX6-1P78426 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.75□□□□□ -1.65
NKX6-1P78426 SNORA56-201ENST00000383966 129 ntBASIC4.75□□□□□ -1.65
NKX6-1P78426 Y_RNA.517-201ENST00000384551 106 ntBASIC4.75□□□□□ -1.65
NKX6-1P78426 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.75□□□□□ -1.65
NKX6-1P78426 RPS3AP44-201ENST00000425466 790 ntBASIC4.75□□□□□ -1.65
NKX6-1P78426 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.75□□□□□ -1.65
NKX6-1P78426 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.75□□□□□ -1.65
NKX6-1P78426 HIGD1AP8-201ENST00000453927 274 ntBASIC4.75□□□□□ -1.65
NKX6-1P78426 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NKX6-1P78426 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.75□□□□□ -1.65
NKX6-1P78426 AC113430.1-201ENST00000506872 718 ntBASIC4.75□□□□□ -1.65
NKX6-1P78426 AF131216.2-201ENST00000512316 564 ntBASIC4.75□□□□□ -1.65
NKX6-1P78426 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NKX6-1P78426 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.75□□□□□ -1.65
NKX6-1P78426 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms