Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AP000255.1-201ENST00000610276 676 ntBASIC4.32□□□□□ -1.72
CCNA1P78396 AC015813.4-201ENST00000610469 179 ntBASIC4.32□□□□□ -1.72
CCNA1P78396 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCNA1P78396 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCNA1P78396 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCNA1P78396 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCNA1P78396 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
CCNA1P78396 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.31□□□□□ -1.72
CCNA1P78396 PRO1804-201ENST00000623780 2050 ntBASIC4.31□□□□□ -1.72
CCNA1P78396 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.31□□□□□ -1.72
CCNA1P78396 RNVU1-14-201ENST00000384770 164 ntBASIC4.31□□□□□ -1.72
CCNA1P78396 PRELID3BP11-201ENST00000414230 479 ntBASIC4.31□□□□□ -1.72
CCNA1P78396 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.31□□□□□ -1.72
CCNA1P78396 MTCO1P52-201ENST00000433928 531 ntBASIC4.31□□□□□ -1.72
CCNA1P78396 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.31□□□□□ -1.72
CCNA1P78396 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.31□□□□□ -1.72
CCNA1P78396 AC092641.1-201ENST00000440229 772 ntBASIC4.31□□□□□ -1.72
CCNA1P78396 RPL34P26-201ENST00000445636 354 ntBASIC4.31□□□□□ -1.72
CCNA1P78396 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.31□□□□□ -1.72
CCNA1P78396 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCNA1P78396 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.31□□□□□ -1.72
CCNA1P78396 SNX5P1-201ENST00000505757 1041 ntBASIC4.31□□□□□ -1.72
CCNA1P78396 AC008802.1-201ENST00000519121 791 ntBASIC4.31□□□□□ -1.72
CCNA1P78396 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.31□□□□□ -1.72
CCNA1P78396 AC115085.1-201ENST00000588924 229 ntBASIC4.31□□□□□ -1.72
CCNA1P78396 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.31□□□□□ -1.72
CCNA1P78396 AC084036.1-201ENST00000609190 508 ntBASIC4.31□□□□□ -1.72
CCNA1P78396 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.31□□□□□ -1.72
CCNA1P78396 AC095038.2-201ENST00000621464 1070 ntBASIC4.31□□□□□ -1.72
CCNA1P78396 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.31□□□□□ -1.72
CCNA1P78396 AL392088.2-201ENST00000637607 285 ntBASIC4.31□□□□□ -1.72
CCNA1P78396 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.31□□□□□ -1.72
CCNA1P78396 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
CCNA1P78396 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CCNA1P78396 ZNF33CP-201ENST00000432492 2030 ntBASIC4.31□□□□□ -1.72
CCNA1P78396 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCNA1P78396 AL049781.1-201ENST00000623195 3585 ntBASIC4.3□□□□□ -1.72
CCNA1P78396 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.3□□□□□ -1.72
CCNA1P78396 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCNA1P78396 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
CCNA1P78396 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.3□□□□□ -1.72
CCNA1P78396 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
CCNA1P78396 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.3□□□□□ -1.72
CCNA1P78396 AC004022.2-201ENST00000413824 193 ntBASIC4.3□□□□□ -1.72
CCNA1P78396 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.3□□□□□ -1.72
CCNA1P78396 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.3□□□□□ -1.72
CCNA1P78396 ELOCP11-201ENST00000436690 332 ntBASIC4.3□□□□□ -1.72
CCNA1P78396 ELOCP16-201ENST00000444494 332 ntBASIC4.3□□□□□ -1.72
CCNA1P78396 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.3□□□□□ -1.72
CCNA1P78396 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.3□□□□□ -1.72
CCNA1P78396 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.3□□□□□ -1.72
CCNA1P78396 RPL21P103-201ENST00000479921 488 ntBASIC4.3□□□□□ -1.72
CCNA1P78396 MTATP6P22-201ENST00000507369 598 ntBASIC4.3□□□□□ -1.72
CCNA1P78396 OR5M7P-201ENST00000526140 972 ntBASIC4.3□□□□□ -1.72
CCNA1P78396 AC069240.1-201ENST00000548774 375 ntBASIC4.3□□□□□ -1.72
CCNA1P78396 AC093014.1-201ENST00000548926 724 ntBASIC4.3□□□□□ -1.72
CCNA1P78396 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.3□□□□□ -1.72
CCNA1P78396 AC074029.2-201ENST00000551045 634 ntBASIC4.3□□□□□ -1.72
CCNA1P78396 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.3□□□□□ -1.72
CCNA1P78396 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.3□□□□□ -1.72
CCNA1P78396 EIF1AXP2-201ENST00000555940 413 ntBASIC4.3□□□□□ -1.72
CCNA1P78396 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.3□□□□□ -1.72
CCNA1P78396 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.3□□□□□ -1.72
CCNA1P78396 MTND4LP24-201ENST00000572277 291 ntBASIC4.3□□□□□ -1.72
CCNA1P78396 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.3□□□□□ -1.72
CCNA1P78396 AP003117.2-201ENST00000606010 545 ntBASIC4.3□□□□□ -1.72
CCNA1P78396 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.3□□□□□ -1.72
CCNA1P78396 AL442067.2-201ENST00000614033 363 ntBASIC4.3□□□□□ -1.72
CCNA1P78396 uc_338.32-201ENST00000615087 172 ntBASIC4.3□□□□□ -1.72
CCNA1P78396 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCNA1P78396 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCNA1P78396 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCNA1P78396 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.3□□□□□ -1.72
CCNA1P78396 AC011266.1-201ENST00000624119 3569 ntBASIC4.29□□□□□ -1.72
CCNA1P78396 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCNA1P78396 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.29□□□□□ -1.72
CCNA1P78396 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
CCNA1P78396 MTND4P31-201ENST00000425607 1343 ntBASIC4.29□□□□□ -1.72
CCNA1P78396 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCNA1P78396 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CCNA1P78396 RNA5SP52-201ENST00000362448 134 ntBASIC4.29□□□□□ -1.72
CCNA1P78396 RNA5SP50-201ENST00000363731 107 ntBASIC4.29□□□□□ -1.72
CCNA1P78396 GCNT6-201ENST00000379591 934 ntBASIC4.29□□□□□ -1.72
CCNA1P78396 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.29□□□□□ -1.72
CCNA1P78396 AL158156.1-201ENST00000422509 473 ntBASIC4.29□□□□□ -1.72
CCNA1P78396 RPL7P4-203ENST00000430239 730 ntBASIC4.29□□□□□ -1.72
CCNA1P78396 AC023347.2-201ENST00000433994 462 ntBASIC4.29□□□□□ -1.72
CCNA1P78396 AC073063.1-201ENST00000434352 607 ntBASIC4.29□□□□□ -1.72
CCNA1P78396 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.29□□□□□ -1.72
CCNA1P78396 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.29□□□□□ -1.72
CCNA1P78396 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.29□□□□□ -1.72
CCNA1P78396 RPL37P3-201ENST00000456825 293 ntBASIC4.29□□□□□ -1.72
CCNA1P78396 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.29□□□□□ -1.72
CCNA1P78396 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
CCNA1P78396 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.29□□□□□ -1.72
CCNA1P78396 FABP5P6-201ENST00000510588 409 ntBASIC4.29□□□□□ -1.72
CCNA1P78396 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.29□□□□□ -1.72
CCNA1P78396 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.29□□□□□ -1.72
CCNA1P78396 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.29□□□□□ -1.72
CCNA1P78396 RFPL1S-203ENST00000539579 330 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms