Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 OR4R1P-201ENST00000529879 463 ntBASIC2.12□□□□□ -2.07
RPS28P62857 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC2.12□□□□□ -2.07
RPS28P62857 NMNAT1P1-201ENST00000554095 876 ntBASIC2.12□□□□□ -2.07
RPS28P62857 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
RPS28P62857 ETFRF1-207ENST00000556351 838 ntAPPRIS ALT1 TSL 2 BASIC2.12□□□□□ -2.07
RPS28P62857 ETFRF1-210ENST00000556927 833 ntAPPRIS ALT1 TSL 3 BASIC2.12□□□□□ -2.07
RPS28P62857 AC087481.2-201ENST00000565492 330 ntBASIC2.12□□□□□ -2.07
RPS28P62857 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.12□□□□□ -2.07
RPS28P62857 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC2.12□□□□□ -2.07
RPS28P62857 LINC01892-201ENST00000579141 507 ntTSL 3 BASIC2.12□□□□□ -2.07
RPS28P62857 AC012417.1-201ENST00000582307 1039 ntBASIC2.12□□□□□ -2.07
RPS28P62857 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC2.12□□□□□ -2.07
RPS28P62857 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC2.12□□□□□ -2.07
RPS28P62857 NTAN1P1-201ENST00000603150 646 ntBASIC2.12□□□□□ -2.07
RPS28P62857 AC245389.1-201ENST00000605141 529 ntBASIC2.12□□□□□ -2.07
RPS28P62857 AC128687.1-201ENST00000605304 619 ntBASIC2.12□□□□□ -2.07
RPS28P62857 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC2.12□□□□□ -2.07
RPS28P62857 NF1P10-201ENST00000613227 742 ntBASIC2.12□□□□□ -2.07
RPS28P62857 AL162574.2-201ENST00000614618 657 ntBASIC2.12□□□□□ -2.07
RPS28P62857 AC026468.1-201ENST00000614981 107 ntBASIC2.12□□□□□ -2.07
RPS28P62857 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
RPS28P62857 MIR6723-201ENST00000621981 89 ntBASIC2.12□□□□□ -2.07
RPS28P62857 AC097372.4-201ENST00000625025 466 ntBASIC2.12□□□□□ -2.07
RPS28P62857 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.12□□□□□ -2.07
RPS28P62857 EXOC1L-202ENST00000636125 863 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
RPS28P62857 FP325313.1-201ENST00000638228 703 ntBASIC2.12□□□□□ -2.07
RPS28P62857 PABPC1P9-201ENST00000426076 1612 ntBASIC2.12□□□□□ -2.07
RPS28P62857 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
RPS28P62857 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
RPS28P62857 AL161431.1-201ENST00000618966 4205 ntBASIC2.12□□□□□ -2.07
RPS28P62857 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
RPS28P62857 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.11□□□□□ -2.07
RPS28P62857 GABRG2-229ENST00000641017 3628 ntBASIC2.11□□□□□ -2.07
RPS28P62857 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
RPS28P62857 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
RPS28P62857 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
RPS28P62857 ZNF519P1-201ENST00000449011 1626 ntBASIC2.11□□□□□ -2.07
RPS28P62857 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
RPS28P62857 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
RPS28P62857 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
RPS28P62857 U3.42-201ENST00000408746 214 ntBASIC2.11□□□□□ -2.07
RPS28P62857 RNA5SP56-201ENST00000410277 118 ntBASIC2.11□□□□□ -2.07
RPS28P62857 AC011933.1-201ENST00000413334 321 ntBASIC2.11□□□□□ -2.07
RPS28P62857 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC2.11□□□□□ -2.07
RPS28P62857 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC2.11□□□□□ -2.07
RPS28P62857 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
RPS28P62857 HNRNPA3P4-201ENST00000427514 803 ntBASIC2.11□□□□□ -2.07
RPS28P62857 HIGD1AP12-201ENST00000427832 281 ntBASIC2.11□□□□□ -2.07
RPS28P62857 AC091132.2-201ENST00000433601 769 ntTSL 3 BASIC2.11□□□□□ -2.07
RPS28P62857 AL590762.3-201ENST00000436372 640 ntBASIC2.11□□□□□ -2.07
RPS28P62857 AC114495.1-201ENST00000441274 436 ntBASIC2.11□□□□□ -2.07
RPS28P62857 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC2.11□□□□□ -2.07
RPS28P62857 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.11□□□□□ -2.07
RPS28P62857 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC2.11□□□□□ -2.07
RPS28P62857 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC2.11□□□□□ -2.07
RPS28P62857 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC2.11□□□□□ -2.07
RPS28P62857 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC2.11□□□□□ -2.07
RPS28P62857 RPS4XP6-201ENST00000477670 797 ntBASIC2.11□□□□□ -2.07
RPS28P62857 RN7SL338P-201ENST00000481467 293 ntBASIC2.11□□□□□ -2.07
RPS28P62857 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC2.11□□□□□ -2.07
RPS28P62857 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.11□□□□□ -2.07
RPS28P62857 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.11□□□□□ -2.07
RPS28P62857 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.11□□□□□ -2.07
RPS28P62857 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
RPS28P62857 AC087272.1-201ENST00000523624 533 ntBASIC2.11□□□□□ -2.07
RPS28P62857 AP000867.2-201ENST00000532468 320 ntBASIC2.11□□□□□ -2.07
RPS28P62857 PCNAP4-201ENST00000532690 730 ntBASIC2.11□□□□□ -2.07
RPS28P62857 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
RPS28P62857 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC2.11□□□□□ -2.07
RPS28P62857 AC005841.1-201ENST00000547042 287 ntTSL 3 BASIC2.11□□□□□ -2.07
RPS28P62857 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC2.11□□□□□ -2.07
RPS28P62857 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC2.11□□□□□ -2.07
RPS28P62857 NOP10-202ENST00000557912 436 ntTSL 2 BASIC2.11□□□□□ -2.07
RPS28P62857 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC2.11□□□□□ -2.07
RPS28P62857 AC018554.2-201ENST00000563482 261 ntBASIC2.11□□□□□ -2.07
RPS28P62857 MRPS21P7-201ENST00000566937 238 ntBASIC2.11□□□□□ -2.07
RPS28P62857 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.11□□□□□ -2.07
RPS28P62857 NPM1P45-201ENST00000583151 559 ntBASIC2.11□□□□□ -2.07
RPS28P62857 MIR5682-201ENST00000584864 76 ntBASIC2.11□□□□□ -2.07
RPS28P62857 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.11□□□□□ -2.07
RPS28P62857 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC2.11□□□□□ -2.07
RPS28P62857 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.11□□□□□ -2.07
RPS28P62857 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.11□□□□□ -2.07
RPS28P62857 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.11□□□□□ -2.07
RPS28P62857 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC2.11□□□□□ -2.07
RPS28P62857 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC2.11□□□□□ -2.07
RPS28P62857 AC135803.1-201ENST00000608748 565 ntBASIC2.11□□□□□ -2.07
RPS28P62857 AP005212.4-201ENST00000614206 710 ntBASIC2.11□□□□□ -2.07
RPS28P62857 AC034102.8-201ENST00000615146 484 ntBASIC2.11□□□□□ -2.07
RPS28P62857 FAM27E2-201ENST00000619668 403 ntBASIC2.11□□□□□ -2.07
RPS28P62857 AL136228.1-201ENST00000622221 319 ntBASIC2.11□□□□□ -2.07
RPS28P62857 CR381572.2-201ENST00000624852 397 ntBASIC2.11□□□□□ -2.07
RPS28P62857 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.11□□□□□ -2.07
RPS28P62857 AC068631.1-215ENST00000630331 490 ntTSL 5 BASIC2.11□□□□□ -2.07
RPS28P62857 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.11□□□□□ -2.07
RPS28P62857 AC093010.3-201ENST00000570269 15214 ntBASIC2.11□□□□□ -2.07
RPS28P62857 AC068647.1-201ENST00000489539 2265 ntBASIC2.11□□□□□ -2.07
RPS28P62857 AL590763.1-201ENST00000398297 1545 ntBASIC2.11□□□□□ -2.07
RPS28P62857 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
RPS28P62857 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 354.8 ms