Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 AC010285.3-201ENST00000511668 676 ntBASIC3.27□□□□□ -1.89
LSM6P62312 RN7SKP141-201ENST00000516167 338 ntBASIC3.27□□□□□ -1.89
LSM6P62312 RN7SKP234-201ENST00000517173 224 ntBASIC3.27□□□□□ -1.89
LSM6P62312 AC008489.1-201ENST00000524271 483 ntBASIC3.27□□□□□ -1.89
LSM6P62312 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.27□□□□□ -1.89
LSM6P62312 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.27□□□□□ -1.89
LSM6P62312 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.27□□□□□ -1.89
LSM6P62312 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.27□□□□□ -1.89
LSM6P62312 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.27□□□□□ -1.89
LSM6P62312 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.27□□□□□ -1.89
LSM6P62312 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.27□□□□□ -1.89
LSM6P62312 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.27□□□□□ -1.89
LSM6P62312 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.27□□□□□ -1.89
LSM6P62312 MIR5187-201ENST00000583479 76 ntBASIC3.27□□□□□ -1.89
LSM6P62312 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.27□□□□□ -1.89
LSM6P62312 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LSM6P62312 AC090425.2-201ENST00000608818 501 ntBASIC3.27□□□□□ -1.89
LSM6P62312 AC090912.3-201ENST00000609775 533 ntBASIC3.27□□□□□ -1.89
LSM6P62312 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LSM6P62312 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.27□□□□□ -1.89
LSM6P62312 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LSM6P62312 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LSM6P62312 AC007342.8-201ENST00000623278 678 ntBASIC3.27□□□□□ -1.89
LSM6P62312 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.27□□□□□ -1.89
LSM6P62312 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC3.27□□□□□ -1.89
LSM6P62312 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LSM6P62312 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
LSM6P62312 CR381670.1-201ENST00000624291 1693 ntBASIC3.27□□□□□ -1.89
LSM6P62312 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LSM6P62312 MTND5P3-201ENST00000438536 1800 ntBASIC3.26□□□□□ -1.89
LSM6P62312 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
LSM6P62312 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LSM6P62312 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
LSM6P62312 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
LSM6P62312 SNORA70E-201ENST00000384492 135 ntBASIC3.26□□□□□ -1.89
LSM6P62312 MIR30B-201ENST00000384850 88 ntBASIC3.26□□□□□ -1.89
LSM6P62312 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.26□□□□□ -1.89
LSM6P62312 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LSM6P62312 AL049610.1-201ENST00000423374 372 ntBASIC3.26□□□□□ -1.89
LSM6P62312 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.26□□□□□ -1.89
LSM6P62312 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LSM6P62312 AC006989.1-201ENST00000427212 131 ntBASIC3.26□□□□□ -1.89
LSM6P62312 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.26□□□□□ -1.89
LSM6P62312 AC004975.1-201ENST00000428733 208 ntBASIC3.26□□□□□ -1.89
LSM6P62312 MOB1AP1-201ENST00000430903 535 ntBASIC3.26□□□□□ -1.89
LSM6P62312 AC023347.2-201ENST00000433994 462 ntBASIC3.26□□□□□ -1.89
LSM6P62312 AC105402.2-201ENST00000438503 358 ntBASIC3.26□□□□□ -1.89
LSM6P62312 MTCYBP31-201ENST00000438855 1122 ntBASIC3.26□□□□□ -1.89
LSM6P62312 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.26□□□□□ -1.89
LSM6P62312 AC239367.2-201ENST00000447309 705 ntBASIC3.26□□□□□ -1.89
LSM6P62312 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.26□□□□□ -1.89
LSM6P62312 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LSM6P62312 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.26□□□□□ -1.89
LSM6P62312 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.26□□□□□ -1.89
LSM6P62312 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.26□□□□□ -1.89
LSM6P62312 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.26□□□□□ -1.89
LSM6P62312 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.26□□□□□ -1.89
LSM6P62312 ACTR6P1-201ENST00000514311 1104 ntBASIC3.26□□□□□ -1.89
LSM6P62312 RNU6-352P-201ENST00000516908 107 ntBASIC3.26□□□□□ -1.89
LSM6P62312 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.26□□□□□ -1.89
LSM6P62312 OR7E13P-201ENST00000526052 910 ntBASIC3.26□□□□□ -1.89
LSM6P62312 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.26□□□□□ -1.89
LSM6P62312 AP000926.4-201ENST00000527351 454 ntBASIC3.26□□□□□ -1.89
LSM6P62312 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.26□□□□□ -1.89
LSM6P62312 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.26□□□□□ -1.89
LSM6P62312 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC3.26□□□□□ -1.89
LSM6P62312 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.26□□□□□ -1.89
LSM6P62312 AP003117.1-201ENST00000602771 554 ntBASIC3.26□□□□□ -1.89
LSM6P62312 AL592295.2-201ENST00000612578 206 ntBASIC3.26□□□□□ -1.89
LSM6P62312 MIR7973-1-201ENST00000614683 76 ntBASIC3.26□□□□□ -1.89
LSM6P62312 AC015726.3-201ENST00000624501 418 ntBASIC3.26□□□□□ -1.89
LSM6P62312 CDRT1-208ENST00000630868 794 ntBASIC3.26□□□□□ -1.89
LSM6P62312 AP000553.6-201ENST00000641242 118 ntBASIC3.26□□□□□ -1.89
LSM6P62312 AL732372.2-225ENST00000642124 456 ntBASIC3.26□□□□□ -1.89
LSM6P62312 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LSM6P62312 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LSM6P62312 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LSM6P62312 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LSM6P62312 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
LSM6P62312 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.26□□□□□ -1.89
LSM6P62312 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
LSM6P62312 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LSM6P62312 RAD1P1-201ENST00000231383 813 ntBASIC3.25□□□□□ -1.89
LSM6P62312 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
LSM6P62312 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
LSM6P62312 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.25□□□□□ -1.89
LSM6P62312 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.25□□□□□ -1.89
LSM6P62312 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.25□□□□□ -1.89
LSM6P62312 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.25□□□□□ -1.89
LSM6P62312 RAB28P1-201ENST00000411517 641 ntBASIC3.25□□□□□ -1.89
LSM6P62312 RPL31P2-201ENST00000413849 377 ntBASIC3.25□□□□□ -1.89
LSM6P62312 AC004987.3-201ENST00000413879 771 ntBASIC3.25□□□□□ -1.89
LSM6P62312 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.25□□□□□ -1.89
LSM6P62312 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.25□□□□□ -1.89
LSM6P62312 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.25□□□□□ -1.89
LSM6P62312 VN1R48P-201ENST00000448149 1036 ntBASIC3.25□□□□□ -1.89
LSM6P62312 UBDP1-202ENST00000457888 382 ntBASIC3.25□□□□□ -1.89
LSM6P62312 AL133162.1-201ENST00000463228 453 ntBASIC3.25□□□□□ -1.89
LSM6P62312 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.25□□□□□ -1.89
LSM6P62312 AL133372.1-201ENST00000493565 745 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms