Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 RPS27AP12-201ENST00000429552 465 ntBASIC5.31□□□□□ -1.56
RHBDL3P58872 AC011998.1-201ENST00000433403 117 ntBASIC5.31□□□□□ -1.56
RHBDL3P58872 AL035246.1-201ENST00000433554 1255 ntBASIC5.31□□□□□ -1.56
RHBDL3P58872 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.31□□□□□ -1.56
RHBDL3P58872 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.31□□□□□ -1.56
RHBDL3P58872 NDUFS5P3-201ENST00000450668 321 ntBASIC5.31□□□□□ -1.56
RHBDL3P58872 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.31□□□□□ -1.56
RHBDL3P58872 PTGES3P5-201ENST00000455109 434 ntBASIC5.31□□□□□ -1.56
RHBDL3P58872 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.31□□□□□ -1.56
RHBDL3P58872 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC5.31□□□□□ -1.56
RHBDL3P58872 HMGB3P16-201ENST00000508037 287 ntBASIC5.31□□□□□ -1.56
RHBDL3P58872 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.31□□□□□ -1.56
RHBDL3P58872 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.31□□□□□ -1.56
RHBDL3P58872 SNORA48.10-201ENST00000516965 160 ntBASIC5.31□□□□□ -1.56
RHBDL3P58872 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.31□□□□□ -1.56
RHBDL3P58872 AP003730.1-201ENST00000524605 285 ntBASIC5.31□□□□□ -1.56
RHBDL3P58872 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC5.31□□□□□ -1.56
RHBDL3P58872 AP000790.1-201ENST00000528891 737 ntBASIC5.31□□□□□ -1.56
RHBDL3P58872 OR4A12P-201ENST00000530847 918 ntBASIC5.31□□□□□ -1.56
RHBDL3P58872 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.31□□□□□ -1.56
RHBDL3P58872 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.31□□□□□ -1.56
RHBDL3P58872 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.31□□□□□ -1.56
RHBDL3P58872 MIR3936-201ENST00000584304 110 ntBASIC5.31□□□□□ -1.56
RHBDL3P58872 SNORD39.3-201ENST00000584451 71 ntBASIC5.31□□□□□ -1.56
RHBDL3P58872 OR4G1P-201ENST00000588632 938 ntBASIC5.31□□□□□ -1.56
RHBDL3P58872 AC083899.3-201ENST00000603413 594 ntBASIC5.31□□□□□ -1.56
RHBDL3P58872 AC079587.1-201ENST00000603846 277 ntBASIC5.31□□□□□ -1.56
RHBDL3P58872 AC016877.3-201ENST00000606778 504 ntBASIC5.31□□□□□ -1.56
RHBDL3P58872 AC005332.6-201ENST00000613178 446 ntBASIC5.31□□□□□ -1.56
RHBDL3P58872 AC022509.4-201ENST00000621404 572 ntBASIC5.31□□□□□ -1.56
RHBDL3P58872 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC5.31□□□□□ -1.56
RHBDL3P58872 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.31□□□□□ -1.56
RHBDL3P58872 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.31□□□□□ -1.56
RHBDL3P58872 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC5.31□□□□□ -1.56
RHBDL3P58872 AC090897.3-201ENST00000636973 1157 ntBASIC5.31□□□□□ -1.56
RHBDL3P58872 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RHBDL3P58872 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.31□□□□□ -1.56
RHBDL3P58872 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RHBDL3P58872 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RHBDL3P58872 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RHBDL3P58872 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
RHBDL3P58872 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
RHBDL3P58872 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RHBDL3P58872 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
RHBDL3P58872 MTND4P10-201ENST00000446199 1363 ntBASIC5.3□□□□□ -1.56
RHBDL3P58872 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
RHBDL3P58872 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RHBDL3P58872 OR11H5P-202ENST00000641612 1325 ntBASIC5.3□□□□□ -1.56
RHBDL3P58872 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.3□□□□□ -1.56
RHBDL3P58872 ZNF734P-201ENST00000419494 1534 ntBASIC5.3□□□□□ -1.56
RHBDL3P58872 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
RHBDL3P58872 MIR3065-201ENST00000390137 79 ntBASIC5.3□□□□□ -1.56
RHBDL3P58872 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.3□□□□□ -1.56
RHBDL3P58872 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC5.3□□□□□ -1.56
RHBDL3P58872 Z74021.1-201ENST00000423610 407 ntBASIC5.3□□□□□ -1.56
RHBDL3P58872 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.3□□□□□ -1.56
RHBDL3P58872 SKP1P3-201ENST00000429280 487 ntBASIC5.3□□□□□ -1.56
RHBDL3P58872 USP9YP31-201ENST00000431405 881 ntBASIC5.3□□□□□ -1.56
RHBDL3P58872 CKS1BP5-201ENST00000434172 273 ntBASIC5.3□□□□□ -1.56
RHBDL3P58872 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.3□□□□□ -1.56
RHBDL3P58872 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.3□□□□□ -1.56
RHBDL3P58872 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.3□□□□□ -1.56
RHBDL3P58872 AC004022.1-201ENST00000447766 1066 ntBASIC5.3□□□□□ -1.56
RHBDL3P58872 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.3□□□□□ -1.56
RHBDL3P58872 AC084024.2-201ENST00000503480 791 ntBASIC5.3□□□□□ -1.56
RHBDL3P58872 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.3□□□□□ -1.56
RHBDL3P58872 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RHBDL3P58872 RNU6-415P-201ENST00000516252 97 ntBASIC5.3□□□□□ -1.56
RHBDL3P58872 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.3□□□□□ -1.56
RHBDL3P58872 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.3□□□□□ -1.56
RHBDL3P58872 IGLVIV-53-201ENST00000520107 367 ntBASIC5.3□□□□□ -1.56
RHBDL3P58872 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.3□□□□□ -1.56
RHBDL3P58872 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.3□□□□□ -1.56
RHBDL3P58872 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.3□□□□□ -1.56
RHBDL3P58872 AP000619.3-201ENST00000535634 1127 ntBASIC5.3□□□□□ -1.56
RHBDL3P58872 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.3□□□□□ -1.56
RHBDL3P58872 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.3□□□□□ -1.56
RHBDL3P58872 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.3□□□□□ -1.56
RHBDL3P58872 MIR4472-2-201ENST00000582069 67 ntBASIC5.3□□□□□ -1.56
RHBDL3P58872 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RHBDL3P58872 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.3□□□□□ -1.56
RHBDL3P58872 AC106052.1-201ENST00000608029 497 ntBASIC5.3□□□□□ -1.56
RHBDL3P58872 AC092954.1-201ENST00000609121 445 ntBASIC5.3□□□□□ -1.56
RHBDL3P58872 uc_338.13-201ENST00000618243 179 ntBASIC5.3□□□□□ -1.56
RHBDL3P58872 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.3□□□□□ -1.56
RHBDL3P58872 AC006065.5-201ENST00000623427 349 ntBASIC5.3□□□□□ -1.56
RHBDL3P58872 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.3□□□□□ -1.56
RHBDL3P58872 MKKS-204ENST00000639674 192 ntBASIC5.3□□□□□ -1.56
RHBDL3P58872 AC139769.1-204ENST00000472297 1931 ntBASIC5.3□□□□□ -1.56
RHBDL3P58872 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RHBDL3P58872 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
RHBDL3P58872 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RHBDL3P58872 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RHBDL3P58872 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.29□□□□□ -1.56
RHBDL3P58872 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.29□□□□□ -1.56
RHBDL3P58872 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RHBDL3P58872 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.29□□□□□ -1.56
RHBDL3P58872 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.29□□□□□ -1.56
RHBDL3P58872 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RHBDL3P58872 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms