Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AL451074.6-201ENST00000608512 729 ntBASIC4.15□□□□□ -1.75
CLDN20P56880 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
CLDN20P56880 AC015908.5-201ENST00000623289 343 ntBASIC4.15□□□□□ -1.75
CLDN20P56880 AC067931.1-201ENST00000624190 671 ntBASIC4.15□□□□□ -1.75
CLDN20P56880 AL512506.2-201ENST00000624472 458 ntBASIC4.15□□□□□ -1.75
CLDN20P56880 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.15□□□□□ -1.75
CLDN20P56880 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
CLDN20P56880 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLDN20P56880 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.15□□□□□ -1.75
CLDN20P56880 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CLDN20P56880 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CLDN20P56880 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.15□□□□□ -1.75
CLDN20P56880 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLDN20P56880 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLDN20P56880 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CLDN20P56880 AC105074.1-201ENST00000623380 3095 ntBASIC4.15□□□□□ -1.75
CLDN20P56880 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLDN20P56880 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.14□□□□□ -1.75
CLDN20P56880 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CLDN20P56880 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.14□□□□□ -1.75
CLDN20P56880 AC135352.1-201ENST00000506173 1418 ntBASIC4.14□□□□□ -1.75
CLDN20P56880 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLDN20P56880 AL451142.2-201ENST00000429076 2090 ntBASIC4.14□□□□□ -1.75
CLDN20P56880 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLDN20P56880 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLDN20P56880 AC016716.1-201ENST00000265882 708 ntBASIC4.14□□□□□ -1.75
CLDN20P56880 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLDN20P56880 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.14□□□□□ -1.75
CLDN20P56880 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.14□□□□□ -1.75
CLDN20P56880 RPS3AP23-201ENST00000401762 784 ntBASIC4.14□□□□□ -1.75
CLDN20P56880 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.14□□□□□ -1.75
CLDN20P56880 AC233981.1-201ENST00000423224 461 ntBASIC4.14□□□□□ -1.75
CLDN20P56880 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.14□□□□□ -1.75
CLDN20P56880 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.14□□□□□ -1.75
CLDN20P56880 RPEP3-201ENST00000425462 676 ntBASIC4.14□□□□□ -1.75
CLDN20P56880 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.14□□□□□ -1.75
CLDN20P56880 CENPIP1-201ENST00000425713 902 ntBASIC4.14□□□□□ -1.75
CLDN20P56880 MTND5P25-201ENST00000430499 799 ntBASIC4.14□□□□□ -1.75
CLDN20P56880 MTND1P32-201ENST00000433043 938 ntBASIC4.14□□□□□ -1.75
CLDN20P56880 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.14□□□□□ -1.75
CLDN20P56880 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.14□□□□□ -1.75
CLDN20P56880 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.14□□□□□ -1.75
CLDN20P56880 MTCYBP11-201ENST00000447254 1109 ntBASIC4.14□□□□□ -1.75
CLDN20P56880 EIF4A1P11-201ENST00000451239 222 ntBASIC4.14□□□□□ -1.75
CLDN20P56880 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.14□□□□□ -1.75
CLDN20P56880 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLDN20P56880 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.14□□□□□ -1.75
CLDN20P56880 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.14□□□□□ -1.75
CLDN20P56880 RPS15AP1-201ENST00000457423 391 ntBASIC4.14□□□□□ -1.75
CLDN20P56880 NF1P3-201ENST00000457709 450 ntBASIC4.14□□□□□ -1.75
CLDN20P56880 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.14□□□□□ -1.75
CLDN20P56880 AC006463.2-201ENST00000473326 348 ntBASIC4.14□□□□□ -1.75
CLDN20P56880 WBP1LP4-201ENST00000505043 344 ntBASIC4.14□□□□□ -1.75
CLDN20P56880 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.14□□□□□ -1.75
CLDN20P56880 AC116353.3-201ENST00000511215 249 ntBASIC4.14□□□□□ -1.75
CLDN20P56880 RNU6-202P-201ENST00000515998 96 ntBASIC4.14□□□□□ -1.75
CLDN20P56880 AC008694.2-201ENST00000517591 306 ntBASIC4.14□□□□□ -1.75
CLDN20P56880 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.14□□□□□ -1.75
CLDN20P56880 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.14□□□□□ -1.75
CLDN20P56880 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.14□□□□□ -1.75
CLDN20P56880 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.14□□□□□ -1.75
CLDN20P56880 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.14□□□□□ -1.75
CLDN20P56880 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.14□□□□□ -1.75
CLDN20P56880 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.14□□□□□ -1.75
CLDN20P56880 AC022069.1-201ENST00000582910 658 ntBASIC4.14□□□□□ -1.75
CLDN20P56880 AC008759.1-201ENST00000589783 983 ntBASIC4.14□□□□□ -1.75
CLDN20P56880 AC093765.1-201ENST00000603758 881 ntBASIC4.14□□□□□ -1.75
CLDN20P56880 AL354760.1-201ENST00000608357 643 ntBASIC4.14□□□□□ -1.75
CLDN20P56880 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.14□□□□□ -1.75
CLDN20P56880 AL121873.1-201ENST00000616013 524 ntBASIC4.14□□□□□ -1.75
CLDN20P56880 AC121761.2-201ENST00000617300 689 ntBASIC4.14□□□□□ -1.75
CLDN20P56880 MIR4278-201ENST00000636094 69 ntBASIC4.14□□□□□ -1.75
CLDN20P56880 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLDN20P56880 KARSP3-201ENST00000571212 1504 ntBASIC4.14□□□□□ -1.75
CLDN20P56880 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.14□□□□□ -1.75
CLDN20P56880 AC109315.1-201ENST00000584143 1347 ntBASIC4.14□□□□□ -1.75
CLDN20P56880 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.14□□□□□ -1.75
CLDN20P56880 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLDN20P56880 DDX18P3-201ENST00000404856 2007 ntBASIC4.14□□□□□ -1.75
CLDN20P56880 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLDN20P56880 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CLDN20P56880 AC093535.2-201ENST00000624769 2326 ntBASIC4.13□□□□□ -1.75
CLDN20P56880 XPOTP1-201ENST00000443317 2398 ntBASIC4.13□□□□□ -1.75
CLDN20P56880 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CLDN20P56880 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.13□□□□□ -1.75
CLDN20P56880 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
CLDN20P56880 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLDN20P56880 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLDN20P56880 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.13□□□□□ -1.75
CLDN20P56880 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.13□□□□□ -1.75
CLDN20P56880 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CLDN20P56880 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.13□□□□□ -1.75
CLDN20P56880 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLDN20P56880 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLDN20P56880 OR10J6P-201ENST00000289731 930 ntBASIC4.13□□□□□ -1.75
CLDN20P56880 OR56B2P-201ENST00000317102 954 ntBASIC4.13□□□□□ -1.75
CLDN20P56880 SNORD74.4-201ENST00000364129 80 ntBASIC4.13□□□□□ -1.75
CLDN20P56880 SUGT1P1-201ENST00000379514 476 ntBASIC4.13□□□□□ -1.75
CLDN20P56880 MIR659-201ENST00000384963 97 ntBASIC4.13□□□□□ -1.75
CLDN20P56880 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms