Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC007546.1-201ENST00000619452 559 ntBASIC4.15□□□□□ -1.75
PDX1P52945 AP003072.4-201ENST00000624580 310 ntBASIC4.15□□□□□ -1.75
PDX1P52945 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
PDX1P52945 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.15□□□□□ -1.75
PDX1P52945 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PDX1P52945 AC046144.1-201ENST00000478559 1853 ntBASIC4.15□□□□□ -1.75
PDX1P52945 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
PDX1P52945 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
PDX1P52945 AC022031.1-201ENST00000585985 2593 ntBASIC4.14□□□□□ -1.75
PDX1P52945 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PDX1P52945 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.14□□□□□ -1.75
PDX1P52945 AC092162.3-201ENST00000624511 1624 ntBASIC4.14□□□□□ -1.75
PDX1P52945 CYP1D1P-201ENST00000416662 1433 ntBASIC4.14□□□□□ -1.75
PDX1P52945 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PDX1P52945 RNU1-14P-201ENST00000362759 152 ntBASIC4.14□□□□□ -1.75
PDX1P52945 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
PDX1P52945 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PDX1P52945 OR52E6-202ENST00000379946 954 ntBASIC4.14□□□□□ -1.75
PDX1P52945 RNU6-1242P-201ENST00000391052 103 ntBASIC4.14□□□□□ -1.75
PDX1P52945 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
PDX1P52945 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.14□□□□□ -1.75
PDX1P52945 RNA5SP36-201ENST00000410197 133 ntBASIC4.14□□□□□ -1.75
PDX1P52945 RN7SKP235-201ENST00000410662 305 ntBASIC4.14□□□□□ -1.75
PDX1P52945 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.14□□□□□ -1.75
PDX1P52945 SSR1P2-201ENST00000415208 787 ntBASIC4.14□□□□□ -1.75
PDX1P52945 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.14□□□□□ -1.75
PDX1P52945 PAICSP7-201ENST00000419829 962 ntBASIC4.14□□□□□ -1.75
PDX1P52945 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.14□□□□□ -1.75
PDX1P52945 COX6B1P7-201ENST00000430845 235 ntBASIC4.14□□□□□ -1.75
PDX1P52945 USP9YP24-201ENST00000434374 697 ntBASIC4.14□□□□□ -1.75
PDX1P52945 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.14□□□□□ -1.75
PDX1P52945 USP9YP17-201ENST00000444617 696 ntBASIC4.14□□□□□ -1.75
PDX1P52945 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PDX1P52945 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.14□□□□□ -1.75
PDX1P52945 DDX39BP2-208ENST00000453923 258 ntBASIC4.14□□□□□ -1.75
PDX1P52945 PTGES3P5-201ENST00000455109 434 ntBASIC4.14□□□□□ -1.75
PDX1P52945 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.14□□□□□ -1.75
PDX1P52945 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.14□□□□□ -1.75
PDX1P52945 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.14□□□□□ -1.75
PDX1P52945 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.14□□□□□ -1.75
PDX1P52945 MTCO1P49-201ENST00000523429 802 ntBASIC4.14□□□□□ -1.75
PDX1P52945 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.14□□□□□ -1.75
PDX1P52945 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.14□□□□□ -1.75
PDX1P52945 AC092747.2-201ENST00000545069 983 ntBASIC4.14□□□□□ -1.75
PDX1P52945 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.14□□□□□ -1.75
PDX1P52945 AL442163.2-201ENST00000553912 710 ntBASIC4.14□□□□□ -1.75
PDX1P52945 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.14□□□□□ -1.75
PDX1P52945 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.14□□□□□ -1.75
PDX1P52945 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.14□□□□□ -1.75
PDX1P52945 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.14□□□□□ -1.75
PDX1P52945 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.14□□□□□ -1.75
PDX1P52945 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.14□□□□□ -1.75
PDX1P52945 CCDC58P3-201ENST00000590792 430 ntBASIC4.14□□□□□ -1.75
PDX1P52945 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.14□□□□□ -1.75
PDX1P52945 MTND3P19-201ENST00000603825 345 ntBASIC4.14□□□□□ -1.75
PDX1P52945 AC063944.3-201ENST00000609969 533 ntBASIC4.14□□□□□ -1.75
PDX1P52945 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.14□□□□□ -1.75
PDX1P52945 AC006133.1-201ENST00000617106 264 ntBASIC4.14□□□□□ -1.75
PDX1P52945 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.14□□□□□ -1.75
PDX1P52945 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.14□□□□□ -1.75
PDX1P52945 AC015908.5-201ENST00000623289 343 ntBASIC4.14□□□□□ -1.75
PDX1P52945 AC112484.5-201ENST00000624189 228 ntBASIC4.14□□□□□ -1.75
PDX1P52945 AC107027.3-201ENST00000565095 3473 ntBASIC4.14□□□□□ -1.75
PDX1P52945 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PDX1P52945 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PDX1P52945 AC087190.4-201ENST00000574616 8334 ntBASIC4.14□□□□□ -1.75
PDX1P52945 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
PDX1P52945 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
PDX1P52945 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.14□□□□□ -1.75
PDX1P52945 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.14□□□□□ -1.75
PDX1P52945 AC134882.1-201ENST00000603738 1676 ntBASIC4.13□□□□□ -1.75
PDX1P52945 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PDX1P52945 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
PDX1P52945 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PDX1P52945 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.13□□□□□ -1.75
PDX1P52945 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.13□□□□□ -1.75
PDX1P52945 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PDX1P52945 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
PDX1P52945 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
PDX1P52945 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PDX1P52945 MIR16-1-201ENST00000385271 89 ntBASIC4.13□□□□□ -1.75
PDX1P52945 RNA5SP171-201ENST00000391071 115 ntBASIC4.13□□□□□ -1.75
PDX1P52945 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PDX1P52945 AL078604.1-201ENST00000404609 466 ntBASIC4.13□□□□□ -1.75
PDX1P52945 RNU2-65P-201ENST00000410162 185 ntBASIC4.13□□□□□ -1.75
PDX1P52945 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.13□□□□□ -1.75
PDX1P52945 RPS20P14-201ENST00000412545 360 ntBASIC4.13□□□□□ -1.75
PDX1P52945 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.13□□□□□ -1.75
PDX1P52945 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.13□□□□□ -1.75
PDX1P52945 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.13□□□□□ -1.75
PDX1P52945 AL590609.2-201ENST00000421430 368 ntBASIC4.13□□□□□ -1.75
PDX1P52945 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.13□□□□□ -1.75
PDX1P52945 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.13□□□□□ -1.75
PDX1P52945 MOB1AP1-201ENST00000430903 535 ntBASIC4.13□□□□□ -1.75
PDX1P52945 NANOGP2-201ENST00000435391 727 ntBASIC4.13□□□□□ -1.75
PDX1P52945 AL356276.2-201ENST00000435919 558 ntBASIC4.13□□□□□ -1.75
PDX1P52945 AC112492.1-201ENST00000449607 712 ntBASIC4.13□□□□□ -1.75
PDX1P52945 ZNF886P-201ENST00000450781 723 ntBASIC4.13□□□□□ -1.75
PDX1P52945 NPM1P13-201ENST00000452663 865 ntBASIC4.13□□□□□ -1.75
PDX1P52945 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms