Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
NEK3P51956 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
NEK3P51956 AC009643.2-201ENST00000603543 1448 ntBASIC4.99□□□□□ -1.61
NEK3P51956 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NEK3P51956 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NEK3P51956 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.99□□□□□ -1.61
NEK3P51956 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NEK3P51956 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NEK3P51956 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.99□□□□□ -1.61
NEK3P51956 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NEK3P51956 AF228730.1-201ENST00000397972 663 ntBASIC4.99□□□□□ -1.61
NEK3P51956 RSL24D1P4-201ENST00000400938 484 ntBASIC4.99□□□□□ -1.61
NEK3P51956 HMGB1P17-201ENST00000403495 628 ntBASIC4.99□□□□□ -1.61
NEK3P51956 AL592291.1-201ENST00000403830 352 ntBASIC4.99□□□□□ -1.61
NEK3P51956 TPT1P2-201ENST00000413105 503 ntBASIC4.99□□□□□ -1.61
NEK3P51956 GTF2IP5-201ENST00000414608 731 ntBASIC4.99□□□□□ -1.61
NEK3P51956 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.99□□□□□ -1.61
NEK3P51956 AL049610.1-201ENST00000423374 372 ntBASIC4.99□□□□□ -1.61
NEK3P51956 EIF4HP2-201ENST00000424380 563 ntBASIC4.99□□□□□ -1.61
NEK3P51956 AC093414.1-201ENST00000434712 514 ntBASIC4.99□□□□□ -1.61
NEK3P51956 MTCYBP34-201ENST00000439552 670 ntBASIC4.99□□□□□ -1.61
NEK3P51956 Z80107.2-201ENST00000445127 392 ntBASIC4.99□□□□□ -1.61
NEK3P51956 MTND1P31-201ENST00000449206 961 ntBASIC4.99□□□□□ -1.61
NEK3P51956 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.99□□□□□ -1.61
NEK3P51956 AC108751.2-201ENST00000469993 231 ntBASIC4.99□□□□□ -1.61
NEK3P51956 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.99□□□□□ -1.61
NEK3P51956 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.99□□□□□ -1.61
NEK3P51956 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.99□□□□□ -1.61
NEK3P51956 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
NEK3P51956 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.99□□□□□ -1.61
NEK3P51956 HSPA8P13-201ENST00000523715 472 ntBASIC4.99□□□□□ -1.61
NEK3P51956 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NEK3P51956 ZNF321P-202ENST00000550843 495 ntBASIC4.99□□□□□ -1.61
NEK3P51956 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.99□□□□□ -1.61
NEK3P51956 AC073091.2-201ENST00000603205 907 ntBASIC4.99□□□□□ -1.61
NEK3P51956 AC080013.4-201ENST00000607624 649 ntBASIC4.99□□□□□ -1.61
NEK3P51956 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.99□□□□□ -1.61
NEK3P51956 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.99□□□□□ -1.61
NEK3P51956 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NEK3P51956 SDAD1P1-202ENST00000524156 2051 ntBASIC4.99□□□□□ -1.61
NEK3P51956 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NEK3P51956 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.99□□□□□ -1.61
NEK3P51956 AL359893.1-201ENST00000447628 1580 ntBASIC4.99□□□□□ -1.61
NEK3P51956 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
NEK3P51956 OR5BR1P-201ENST00000524992 1330 ntBASIC4.98□□□□□ -1.61
NEK3P51956 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NEK3P51956 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NEK3P51956 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NEK3P51956 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.98□□□□□ -1.61
NEK3P51956 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
NEK3P51956 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.98□□□□□ -1.61
NEK3P51956 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NEK3P51956 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
NEK3P51956 RNU6-730P-201ENST00000383954 104 ntBASIC4.98□□□□□ -1.61
NEK3P51956 SNRPEP2-201ENST00000397592 279 ntBASIC4.98□□□□□ -1.61
NEK3P51956 RN7SKP199-201ENST00000410325 305 ntBASIC4.98□□□□□ -1.61
NEK3P51956 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.98□□□□□ -1.61
NEK3P51956 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.98□□□□□ -1.61
NEK3P51956 RPS12P23-201ENST00000419579 400 ntBASIC4.98□□□□□ -1.61
NEK3P51956 MTCYBP24-201ENST00000420387 1106 ntBASIC4.98□□□□□ -1.61
NEK3P51956 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.98□□□□□ -1.61
NEK3P51956 RWDD4P2-201ENST00000426392 563 ntBASIC4.98□□□□□ -1.61
NEK3P51956 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.98□□□□□ -1.61
NEK3P51956 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.98□□□□□ -1.61
NEK3P51956 RPS25P9-201ENST00000435591 252 ntBASIC4.98□□□□□ -1.61
NEK3P51956 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NEK3P51956 H2AFZP5-201ENST00000446960 382 ntBASIC4.98□□□□□ -1.61
NEK3P51956 SLC25A18P1-201ENST00000449385 454 ntBASIC4.98□□□□□ -1.61
NEK3P51956 AL162388.1-201ENST00000450912 352 ntBASIC4.98□□□□□ -1.61
NEK3P51956 TRGVB-201ENST00000453257 471 ntBASIC4.98□□□□□ -1.61
NEK3P51956 AC026410.2-201ENST00000460281 156 ntBASIC4.98□□□□□ -1.61
NEK3P51956 AP000942.1-201ENST00000463969 747 ntBASIC4.98□□□□□ -1.61
NEK3P51956 AC063943.1-201ENST00000465434 453 ntBASIC4.98□□□□□ -1.61
NEK3P51956 PABPC1P3-201ENST00000469174 459 ntBASIC4.98□□□□□ -1.61
NEK3P51956 RPS15AP17-201ENST00000470598 390 ntBASIC4.98□□□□□ -1.61
NEK3P51956 AC022034.3-201ENST00000471393 478 ntBASIC4.98□□□□□ -1.61
NEK3P51956 OR5H5P-201ENST00000503164 928 ntBASIC4.98□□□□□ -1.61
NEK3P51956 ARL4AP1-201ENST00000503220 705 ntBASIC4.98□□□□□ -1.61
NEK3P51956 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NEK3P51956 PTGES3P3-201ENST00000511479 482 ntBASIC4.98□□□□□ -1.61
NEK3P51956 AC026412.2-201ENST00000512270 1075 ntBASIC4.98□□□□□ -1.61
NEK3P51956 HNRNPKP5-201ENST00000515300 253 ntBASIC4.98□□□□□ -1.61
NEK3P51956 RNU4-60P-201ENST00000517239 135 ntBASIC4.98□□□□□ -1.61
NEK3P51956 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.98□□□□□ -1.61
NEK3P51956 OR6C73P-201ENST00000546432 358 ntBASIC4.98□□□□□ -1.61
NEK3P51956 MRPS36P5-201ENST00000551909 298 ntBASIC4.98□□□□□ -1.61
NEK3P51956 DUXAP6-201ENST00000553858 601 ntBASIC4.98□□□□□ -1.61
NEK3P51956 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.98□□□□□ -1.61
NEK3P51956 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.98□□□□□ -1.61
NEK3P51956 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.98□□□□□ -1.61
NEK3P51956 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.98□□□□□ -1.61
NEK3P51956 AC145350.1-201ENST00000567426 208 ntBASIC4.98□□□□□ -1.61
NEK3P51956 MIR3667-201ENST00000581025 74 ntBASIC4.98□□□□□ -1.61
NEK3P51956 MIR4737-201ENST00000583979 81 ntBASIC4.98□□□□□ -1.61
NEK3P51956 AC103881.1-201ENST00000603476 538 ntBASIC4.98□□□□□ -1.61
NEK3P51956 AC010680.3-201ENST00000604215 520 ntBASIC4.98□□□□□ -1.61
NEK3P51956 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.98□□□□□ -1.61
NEK3P51956 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NEK3P51956 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
NEK3P51956 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms