Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.35□□□□□ -1.71
CLCNKAP51800 NOL8P1-201ENST00000508336 3529 ntBASIC4.35□□□□□ -1.71
CLCNKAP51800 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLCNKAP51800 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.35□□□□□ -1.71
CLCNKAP51800 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLCNKAP51800 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.35□□□□□ -1.71
CLCNKAP51800 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.35□□□□□ -1.71
CLCNKAP51800 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLCNKAP51800 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CLCNKAP51800 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.35□□□□□ -1.71
CLCNKAP51800 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.35□□□□□ -1.71
CLCNKAP51800 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.35□□□□□ -1.71
CLCNKAP51800 MIR708-201ENST00000390708 88 ntBASIC4.35□□□□□ -1.71
CLCNKAP51800 AC119751.3-201ENST00000399720 670 ntBASIC4.35□□□□□ -1.71
CLCNKAP51800 RNU2-6P-201ENST00000411404 190 ntBASIC4.35□□□□□ -1.71
CLCNKAP51800 AL160275.2-201ENST00000412010 394 ntBASIC4.35□□□□□ -1.71
CLCNKAP51800 AC009237.10-201ENST00000414112 510 ntBASIC4.35□□□□□ -1.71
CLCNKAP51800 AC107081.1-201ENST00000414975 361 ntBASIC4.35□□□□□ -1.71
CLCNKAP51800 C4BPAP2-201ENST00000428434 478 ntBASIC4.35□□□□□ -1.71
CLCNKAP51800 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.35□□□□□ -1.71
CLCNKAP51800 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.35□□□□□ -1.71
CLCNKAP51800 AL132765.1-201ENST00000434165 553 ntBASIC4.35□□□□□ -1.71
CLCNKAP51800 CBX1P1-201ENST00000440184 427 ntBASIC4.35□□□□□ -1.71
CLCNKAP51800 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.35□□□□□ -1.71
CLCNKAP51800 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.35□□□□□ -1.71
CLCNKAP51800 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.35□□□□□ -1.71
CLCNKAP51800 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.35□□□□□ -1.71
CLCNKAP51800 MRPL35P4-201ENST00000453682 566 ntBASIC4.35□□□□□ -1.71
CLCNKAP51800 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.35□□□□□ -1.71
CLCNKAP51800 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLCNKAP51800 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.35□□□□□ -1.71
CLCNKAP51800 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLCNKAP51800 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.35□□□□□ -1.71
CLCNKAP51800 AC034244.1-201ENST00000507687 207 ntBASIC4.35□□□□□ -1.71
CLCNKAP51800 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CLCNKAP51800 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.35□□□□□ -1.71
CLCNKAP51800 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.35□□□□□ -1.71
CLCNKAP51800 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.35□□□□□ -1.71
CLCNKAP51800 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLCNKAP51800 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.35□□□□□ -1.71
CLCNKAP51800 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.35□□□□□ -1.71
CLCNKAP51800 DUXAP6-201ENST00000553858 601 ntBASIC4.35□□□□□ -1.71
CLCNKAP51800 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.35□□□□□ -1.71
CLCNKAP51800 AC090695.1-201ENST00000561269 1222 ntBASIC4.35□□□□□ -1.71
CLCNKAP51800 AADACP1-206ENST00000561502 1193 ntBASIC4.35□□□□□ -1.71
CLCNKAP51800 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.35□□□□□ -1.71
CLCNKAP51800 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.35□□□□□ -1.71
CLCNKAP51800 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.35□□□□□ -1.71
CLCNKAP51800 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.35□□□□□ -1.71
CLCNKAP51800 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.35□□□□□ -1.71
CLCNKAP51800 AC021171.1-201ENST00000603137 706 ntBASIC4.35□□□□□ -1.71
CLCNKAP51800 AC021749.1-201ENST00000604322 607 ntBASIC4.35□□□□□ -1.71
CLCNKAP51800 AC010857.1-201ENST00000606398 594 ntBASIC4.35□□□□□ -1.71
CLCNKAP51800 AP003392.5-201ENST00000607857 415 ntBASIC4.35□□□□□ -1.71
CLCNKAP51800 AC097065.2-201ENST00000608159 533 ntBASIC4.35□□□□□ -1.71
CLCNKAP51800 AL353726.1-201ENST00000614041 1000 ntBASIC4.35□□□□□ -1.71
CLCNKAP51800 uc_338.13-201ENST00000618243 179 ntBASIC4.35□□□□□ -1.71
CLCNKAP51800 AP003072.4-201ENST00000624580 310 ntBASIC4.35□□□□□ -1.71
CLCNKAP51800 AC016717.3-201ENST00000624730 554 ntBASIC4.35□□□□□ -1.71
CLCNKAP51800 MFSD8-245ENST00000641743 948 ntBASIC4.35□□□□□ -1.71
CLCNKAP51800 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLCNKAP51800 KPNA2P2-201ENST00000419546 1489 ntBASIC4.35□□□□□ -1.71
CLCNKAP51800 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLCNKAP51800 EIF2AP4-201ENST00000424793 1781 ntBASIC4.35□□□□□ -1.71
CLCNKAP51800 PNPT1P2-201ENST00000456768 2050 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLCNKAP51800 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLCNKAP51800 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLCNKAP51800 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLCNKAP51800 AL356489.2-201ENST00000566968 3528 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 OR10J6P-201ENST00000289731 930 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 RNU6-1214P-201ENST00000363650 109 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 SNORA74C-2-201ENST00000411179 201 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 RPS20P14-201ENST00000412545 360 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 RPL21P108-201ENST00000413857 481 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 COX6CP17-201ENST00000421389 185 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.34□□□□□ -1.71
CLCNKAP51800 RPS12P5-201ENST00000423449 371 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 CHIAP3-201ENST00000423668 1133 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.34□□□□□ -1.71
CLCNKAP51800 RPL21P110-201ENST00000433345 446 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 AC073143.1-201ENST00000436316 395 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.34□□□□□ -1.71
CLCNKAP51800 TPT1P12-201ENST00000448968 492 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 NECAP1P2-201ENST00000455668 727 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 RN7SL303P-201ENST00000469773 251 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 RPL23AP71-201ENST00000470966 469 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 AP000563.1-201ENST00000490865 758 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 RN7SL812P-201ENST00000493791 279 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.34□□□□□ -1.71
CLCNKAP51800 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.34□□□□□ -1.71
CLCNKAP51800 PRELID3BP7-201ENST00000503606 469 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.34□□□□□ -1.71
CLCNKAP51800 AC118282.2-201ENST00000508739 374 ntBASIC4.34□□□□□ -1.71
CLCNKAP51800 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.34□□□□□ -1.71
CLCNKAP51800 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.34□□□□□ -1.71
CLCNKAP51800 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.34□□□□□ -1.71
CLCNKAP51800 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.34□□□□□ -1.71
CLCNKAP51800 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms