Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC092809.1-201ENST00000441469 474 ntBASIC3.48□□□□□ -1.85
BRCA2P51587 WASF1P1-201ENST00000447560 1131 ntBASIC3.48□□□□□ -1.85
BRCA2P51587 AC090602.1-201ENST00000469695 252 ntBASIC3.48□□□□□ -1.85
BRCA2P51587 IGKV3-31-201ENST00000523109 329 ntBASIC3.48□□□□□ -1.85
BRCA2P51587 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.48□□□□□ -1.85
BRCA2P51587 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
BRCA2P51587 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
BRCA2P51587 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
BRCA2P51587 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
BRCA2P51587 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
BRCA2P51587 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
BRCA2P51587 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC3.47□□□□□ -1.85
BRCA2P51587 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
BRCA2P51587 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.47□□□□□ -1.85
BRCA2P51587 AC025181.1-201ENST00000477507 416 ntBASIC3.47□□□□□ -1.85
BRCA2P51587 AC093815.1-201ENST00000508637 280 ntBASIC3.47□□□□□ -1.85
BRCA2P51587 AADACP1-206ENST00000561502 1193 ntBASIC3.47□□□□□ -1.85
BRCA2P51587 LSM1P2-201ENST00000604911 322 ntBASIC3.47□□□□□ -1.85
BRCA2P51587 AL157817.1-201ENST00000614264 790 ntBASIC3.47□□□□□ -1.85
BRCA2P51587 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
BRCA2P51587 AL049780.3-201ENST00000624612 1583 ntBASIC3.47□□□□□ -1.85
BRCA2P51587 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.47□□□□□ -1.85
BRCA2P51587 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.47□□□□□ -1.85
BRCA2P51587 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
BRCA2P51587 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
BRCA2P51587 MIR764-201ENST00000390811 85 ntBASIC3.47□□□□□ -1.85
BRCA2P51587 HLA-N-201ENST00000437516 135 ntBASIC3.47□□□□□ -1.85
BRCA2P51587 NPM1P39-201ENST00000449818 867 ntBASIC3.47□□□□□ -1.85
BRCA2P51587 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.47□□□□□ -1.85
BRCA2P51587 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.47□□□□□ -1.85
BRCA2P51587 AL022323.4-201ENST00000623980 13120 ntBASIC3.47□□□□□ -1.85
BRCA2P51587 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
BRCA2P51587 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.47□□□□□ -1.85
BRCA2P51587 MIR34A-201ENST00000385130 110 ntBASIC3.47□□□□□ -1.85
BRCA2P51587 AL356057.1-202ENST00000402263 756 ntBASIC3.47□□□□□ -1.85
BRCA2P51587 RPL23AP82-202ENST00000427528 469 ntBASIC3.47□□□□□ -1.85
BRCA2P51587 CENPBD1P1-201ENST00000464061 469 ntBASIC3.47□□□□□ -1.85
BRCA2P51587 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.47□□□□□ -1.85
BRCA2P51587 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.47□□□□□ -1.85
BRCA2P51587 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
BRCA2P51587 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.47□□□□□ -1.85
BRCA2P51587 AC046144.1-201ENST00000478559 1853 ntBASIC3.47□□□□□ -1.85
BRCA2P51587 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC3.47□□□□□ -1.85
BRCA2P51587 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC3.46□□□□□ -1.85
BRCA2P51587 MAPK10-362ENST00000641864 4484 ntBASIC3.46□□□□□ -1.85
BRCA2P51587 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
BRCA2P51587 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
BRCA2P51587 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.46□□□□□ -1.86
BRCA2P51587 AC008264.1-201ENST00000447612 367 ntBASIC3.46□□□□□ -1.86
BRCA2P51587 ATP5F1P7-201ENST00000567330 760 ntBASIC3.46□□□□□ -1.86
BRCA2P51587 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.46□□□□□ -1.86
BRCA2P51587 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
BRCA2P51587 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC3.46□□□□□ -1.86
BRCA2P51587 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
BRCA2P51587 MIR1289-2-201ENST00000408360 111 ntBASIC3.46□□□□□ -1.86
BRCA2P51587 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.46□□□□□ -1.86
BRCA2P51587 AL592148.1-201ENST00000413568 445 ntBASIC3.46□□□□□ -1.86
BRCA2P51587 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.46□□□□□ -1.86
BRCA2P51587 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.46□□□□□ -1.86
BRCA2P51587 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.46□□□□□ -1.86
BRCA2P51587 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.46□□□□□ -1.86
BRCA2P51587 AC006518.1-201ENST00000541449 943 ntBASIC3.46□□□□□ -1.86
BRCA2P51587 AC138761.3-201ENST00000579993 334 ntBASIC3.46□□□□□ -1.86
BRCA2P51587 AC099063.3-201ENST00000642066 185 ntBASIC3.46□□□□□ -1.86
BRCA2P51587 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
BRCA2P51587 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
BRCA2P51587 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
BRCA2P51587 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
BRCA2P51587 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
BRCA2P51587 MIR22-201ENST00000362190 85 ntBASIC3.45□□□□□ -1.86
BRCA2P51587 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.45□□□□□ -1.86
BRCA2P51587 ARL5AP4-201ENST00000430731 512 ntBASIC3.45□□□□□ -1.86
BRCA2P51587 AL591806.2-201ENST00000433122 173 ntBASIC3.45□□□□□ -1.86
BRCA2P51587 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.45□□□□□ -1.86
BRCA2P51587 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.45□□□□□ -1.86
BRCA2P51587 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
BRCA2P51587 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC3.45□□□□□ -1.86
BRCA2P51587 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
BRCA2P51587 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
BRCA2P51587 ASNSP1-201ENST00000518311 1939 ntBASIC3.45□□□□□ -1.86
BRCA2P51587 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
BRCA2P51587 HDGFP1-201ENST00000405943 252 ntBASIC3.45□□□□□ -1.86
BRCA2P51587 AC022018.1-201ENST00000430685 241 ntBASIC3.45□□□□□ -1.86
BRCA2P51587 AC016696.1-201ENST00000446949 318 ntBASIC3.45□□□□□ -1.86
BRCA2P51587 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.45□□□□□ -1.86
BRCA2P51587 AC024153.1-201ENST00000603103 365 ntBASIC3.45□□□□□ -1.86
BRCA2P51587 DCAF13P3-201ENST00000561147 1334 ntBASIC3.45□□□□□ -1.86
BRCA2P51587 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
BRCA2P51587 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
BRCA2P51587 AC063976.3-201ENST00000426849 329 ntBASIC3.45□□□□□ -1.86
BRCA2P51587 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.45□□□□□ -1.86
BRCA2P51587 UBE2V2P4-201ENST00000447495 259 ntBASIC3.45□□□□□ -1.86
BRCA2P51587 HMGB3P22-202ENST00000451823 572 ntBASIC3.45□□□□□ -1.86
BRCA2P51587 SNORD39.4-201ENST00000620099 78 ntBASIC3.45□□□□□ -1.86
BRCA2P51587 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
BRCA2P51587 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
BRCA2P51587 Y_RNA.40-201ENST00000362645 93 ntBASIC3.44□□□□□ -1.86
BRCA2P51587 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.44□□□□□ -1.86
BRCA2P51587 EEF1B2P7-201ENST00000451177 676 ntBASIC3.44□□□□□ -1.86
BRCA2P51587 RPL23AP23-201ENST00000452590 471 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms