Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 PANDAR-201ENST00000629595 1506 ntBASIC3.93□□□□□ -1.78
HOXA1P49639 AL136164.3-201ENST00000624429 3978 ntBASIC3.93□□□□□ -1.78
HOXA1P49639 AC090017.1-201ENST00000548612 1779 ntBASIC3.93□□□□□ -1.78
HOXA1P49639 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HOXA1P49639 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXA1P49639 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HOXA1P49639 AC097504.1-201ENST00000515103 2415 ntBASIC3.93□□□□□ -1.78
HOXA1P49639 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
HOXA1P49639 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXA1P49639 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
HOXA1P49639 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HOXA1P49639 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
HOXA1P49639 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HOXA1P49639 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
HOXA1P49639 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
HOXA1P49639 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
HOXA1P49639 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
HOXA1P49639 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HOXA1P49639 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HOXA1P49639 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.92□□□□□ -1.78
HOXA1P49639 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.92□□□□□ -1.78
HOXA1P49639 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HOXA1P49639 AC007685.1-201ENST00000329806 452 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 RNU6-553P-201ENST00000364047 96 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HOXA1P49639 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HOXA1P49639 RNU6-1151P-201ENST00000384684 107 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 Y_RNA.560-201ENST00000384689 102 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HOXA1P49639 DUTP5-201ENST00000406790 469 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 U3.35-201ENST00000408405 208 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HOXA1P49639 AC068533.2-201ENST00000411872 306 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 RPL35AP24-201ENST00000413846 330 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HOXA1P49639 FCF1P2-201ENST00000415284 583 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 LUZP4P1-201ENST00000415420 344 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 ATP6V1G1P7-201ENST00000415853 349 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXA1P49639 AC009237.2-201ENST00000421358 284 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 MTND4P20-201ENST00000424125 869 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC3.92□□□□□ -1.78
HOXA1P49639 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXA1P49639 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC3.92□□□□□ -1.78
HOXA1P49639 RPS25P9-201ENST00000435591 252 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 AC004938.1-201ENST00000438468 308 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 ELOCP8-201ENST00000439309 332 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 ELOCP15-201ENST00000442090 332 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.92□□□□□ -1.78
HOXA1P49639 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXA1P49639 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXA1P49639 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXA1P49639 RSL24D1P3-201ENST00000449255 495 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.92□□□□□ -1.78
HOXA1P49639 AC073387.1-201ENST00000453261 709 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC3.92□□□□□ -1.78
HOXA1P49639 AC006511.1-201ENST00000470614 315 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.92□□□□□ -1.78
HOXA1P49639 AC012158.1-204ENST00000483430 465 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 AC147055.4-201ENST00000504399 745 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC3.92□□□□□ -1.78
HOXA1P49639 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.92□□□□□ -1.78
HOXA1P49639 AC106872.4-201ENST00000510050 523 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 RNA5SP362-201ENST00000516048 118 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXA1P49639 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXA1P49639 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXA1P49639 AC105185.1-201ENST00000518705 535 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.92□□□□□ -1.78
HOXA1P49639 AP001207.1-201ENST00000524051 481 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC3.92□□□□□ -1.78
HOXA1P49639 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.92□□□□□ -1.78
HOXA1P49639 UBE2NP1-201ENST00000545592 458 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC3.92□□□□□ -1.78
HOXA1P49639 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.92□□□□□ -1.78
HOXA1P49639 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.92□□□□□ -1.78
HOXA1P49639 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC3.92□□□□□ -1.78
HOXA1P49639 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.92□□□□□ -1.78
HOXA1P49639 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.92□□□□□ -1.78
HOXA1P49639 VN1R82P-201ENST00000601481 356 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.92□□□□□ -1.78
HOXA1P49639 AC090181.2-201ENST00000602975 672 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 AC105254.2-201ENST00000603636 436 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.92□□□□□ -1.78
HOXA1P49639 AL355816.1-201ENST00000607951 118 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 AL354976.1-201ENST00000613843 387 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 AC233309.1-201ENST00000619522 751 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 AC099494.2-201ENST00000623371 978 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 AF246928.1-201ENST00000623768 87 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.92□□□□□ -1.78
HOXA1P49639 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.92□□□□□ -1.78
HOXA1P49639 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
HOXA1P49639 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HOXA1P49639 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HOXA1P49639 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.92□□□□□ -1.78
HOXA1P49639 AC092079.1-201ENST00000558620 1985 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.92□□□□□ -1.78
HOXA1P49639 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms