Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 RNU2-28P-201ENST00000410457 189 ntBASIC3.79□□□□□ -1.8
CDX1P47902 LINC00993-201ENST00000420453 540 ntBASIC3.79□□□□□ -1.8
CDX1P47902 RPL7P57-201ENST00000423238 740 ntBASIC3.79□□□□□ -1.8
CDX1P47902 SDCBPP2-201ENST00000424643 885 ntBASIC3.79□□□□□ -1.8
CDX1P47902 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.79□□□□□ -1.8
CDX1P47902 VDAC1P6-201ENST00000430062 855 ntBASIC3.79□□□□□ -1.8
CDX1P47902 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.79□□□□□ -1.8
CDX1P47902 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.79□□□□□ -1.8
CDX1P47902 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC3.79□□□□□ -1.8
CDX1P47902 AL606517.1-201ENST00000446914 387 ntBASIC3.79□□□□□ -1.8
CDX1P47902 MTCO1P48-201ENST00000448024 1096 ntBASIC3.79□□□□□ -1.8
CDX1P47902 TRBV26-201ENST00000456572 344 ntBASIC3.79□□□□□ -1.8
CDX1P47902 RPS5P7-201ENST00000456664 608 ntBASIC3.79□□□□□ -1.8
CDX1P47902 RPS17P2-201ENST00000461663 408 ntBASIC3.79□□□□□ -1.8
CDX1P47902 AC108022.1-201ENST00000493466 478 ntBASIC3.79□□□□□ -1.8
CDX1P47902 AC134050.1-201ENST00000495088 933 ntBASIC3.79□□□□□ -1.8
CDX1P47902 PRELID3BP7-201ENST00000503606 469 ntBASIC3.79□□□□□ -1.8
CDX1P47902 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.79□□□□□ -1.8
CDX1P47902 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.79□□□□□ -1.8
CDX1P47902 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDX1P47902 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.79□□□□□ -1.8
CDX1P47902 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.79□□□□□ -1.8
CDX1P47902 IGKV2D-36-201ENST00000518643 226 ntBASIC3.79□□□□□ -1.8
CDX1P47902 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.79□□□□□ -1.8
CDX1P47902 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.79□□□□□ -1.8
CDX1P47902 AP006289.1-201ENST00000538089 277 ntBASIC3.79□□□□□ -1.8
CDX1P47902 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.79□□□□□ -1.8
CDX1P47902 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC3.79□□□□□ -1.8
CDX1P47902 AC138915.2-201ENST00000569776 97 ntBASIC3.79□□□□□ -1.8
CDX1P47902 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC3.79□□□□□ -1.8
CDX1P47902 MIR4270-201ENST00000581799 70 ntBASIC3.79□□□□□ -1.8
CDX1P47902 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.79□□□□□ -1.8
CDX1P47902 AC025588.3-201ENST00000604182 274 ntBASIC3.79□□□□□ -1.8
CDX1P47902 RNA5SP108-201ENST00000605921 117 ntBASIC3.79□□□□□ -1.8
CDX1P47902 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.79□□□□□ -1.8
CDX1P47902 AC016877.3-201ENST00000606778 504 ntBASIC3.79□□□□□ -1.8
CDX1P47902 AC010424.2-201ENST00000607594 443 ntBASIC3.79□□□□□ -1.8
CDX1P47902 AC007497.1-201ENST00000610421 561 ntBASIC3.79□□□□□ -1.8
CDX1P47902 AC005332.6-201ENST00000613178 446 ntBASIC3.79□□□□□ -1.8
CDX1P47902 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDX1P47902 AC022509.4-201ENST00000621404 572 ntBASIC3.79□□□□□ -1.8
CDX1P47902 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC3.79□□□□□ -1.8
CDX1P47902 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CDX1P47902 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDX1P47902 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC3.79□□□□□ -1.8
CDX1P47902 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDX1P47902 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.79□□□□□ -1.8
CDX1P47902 MTND5P3-201ENST00000438536 1800 ntBASIC3.79□□□□□ -1.8
CDX1P47902 AC012618.3-205ENST00000637896 1496 ntBASIC3.79□□□□□ -1.8
CDX1P47902 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDX1P47902 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDX1P47902 AC099786.3-201ENST00000565735 1410 ntBASIC3.78□□□□□ -1.8
CDX1P47902 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDX1P47902 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDX1P47902 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CDX1P47902 A2MP1-204ENST00000566278 4130 ntBASIC3.78□□□□□ -1.8
CDX1P47902 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDX1P47902 AC015813.6-201ENST00000624409 5808 ntBASIC3.78□□□□□ -1.8
CDX1P47902 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDX1P47902 SEPT7P7-201ENST00000420492 1301 ntBASIC3.78□□□□□ -1.8
CDX1P47902 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.78□□□□□ -1.8
CDX1P47902 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDX1P47902 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDX1P47902 RNU1-130P-201ENST00000363930 160 ntBASIC3.78□□□□□ -1.8
CDX1P47902 RNU6-374P-201ENST00000364146 108 ntBASIC3.78□□□□□ -1.8
CDX1P47902 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDX1P47902 MIR921-201ENST00000401133 56 ntBASIC3.78□□□□□ -1.8
CDX1P47902 RNA5SP345-201ENST00000410646 108 ntBASIC3.78□□□□□ -1.8
CDX1P47902 RN7SKP100-201ENST00000411258 284 ntBASIC3.78□□□□□ -1.8
CDX1P47902 TBCAP2-201ENST00000416175 326 ntBASIC3.78□□□□□ -1.8
CDX1P47902 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.78□□□□□ -1.8
CDX1P47902 QRSL1P2-201ENST00000418582 964 ntBASIC3.78□□□□□ -1.8
CDX1P47902 CYP4F29P-201ENST00000420685 446 ntBASIC3.78□□□□□ -1.8
CDX1P47902 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.78□□□□□ -1.8
CDX1P47902 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC3.78□□□□□ -1.8
CDX1P47902 USP12PY-201ENST00000427677 1064 ntBASIC3.78□□□□□ -1.8
CDX1P47902 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC3.78□□□□□ -1.8
CDX1P47902 NRBF2P3-201ENST00000432731 865 ntBASIC3.78□□□□□ -1.8
CDX1P47902 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.78□□□□□ -1.8
CDX1P47902 AL356276.2-201ENST00000435919 558 ntBASIC3.78□□□□□ -1.8
CDX1P47902 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.78□□□□□ -1.8
CDX1P47902 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC3.78□□□□□ -1.8
CDX1P47902 AC007327.1-201ENST00000447461 264 ntBASIC3.78□□□□□ -1.8
CDX1P47902 AC104073.1-201ENST00000451988 151 ntBASIC3.78□□□□□ -1.8
CDX1P47902 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.78□□□□□ -1.8
CDX1P47902 AL645939.1-201ENST00000453429 797 ntBASIC3.78□□□□□ -1.8
CDX1P47902 AL136126.1-201ENST00000473603 402 ntBASIC3.78□□□□□ -1.8
CDX1P47902 AC007686.1-201ENST00000488511 463 ntBASIC3.78□□□□□ -1.8
CDX1P47902 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.78□□□□□ -1.8
CDX1P47902 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.78□□□□□ -1.8
CDX1P47902 MTCYBP37-201ENST00000510642 1133 ntBASIC3.78□□□□□ -1.8
CDX1P47902 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.78□□□□□ -1.8
CDX1P47902 MTCO1P30-201ENST00000515244 580 ntBASIC3.78□□□□□ -1.8
CDX1P47902 AC008694.2-201ENST00000517591 306 ntBASIC3.78□□□□□ -1.8
CDX1P47902 AC027309.2-201ENST00000520566 192 ntBASIC3.78□□□□□ -1.8
CDX1P47902 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDX1P47902 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CDX1P47902 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.78□□□□□ -1.8
CDX1P47902 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.78□□□□□ -1.8
CDX1P47902 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms