Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 ELOCP8-201ENST00000439309 332 ntBASIC3.49□□□□□ -1.85
HTTP42858 ELOCP15-201ENST00000442090 332 ntBASIC3.49□□□□□ -1.85
HTTP42858 AC069540.1-201ENST00000446320 988 ntBASIC3.49□□□□□ -1.85
HTTP42858 AC016696.1-201ENST00000446949 318 ntBASIC3.49□□□□□ -1.85
HTTP42858 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.49□□□□□ -1.85
HTTP42858 ELOCP23-201ENST00000452014 332 ntBASIC3.49□□□□□ -1.85
HTTP42858 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.49□□□□□ -1.85
HTTP42858 AL136097.1-201ENST00000456945 913 ntBASIC3.49□□□□□ -1.85
HTTP42858 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.49□□□□□ -1.85
HTTP42858 AC008413.1-201ENST00000511864 177 ntBASIC3.49□□□□□ -1.85
HTTP42858 AC109329.2-201ENST00000519658 482 ntBASIC3.49□□□□□ -1.85
HTTP42858 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.49□□□□□ -1.85
HTTP42858 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.49□□□□□ -1.85
HTTP42858 AC138761.3-201ENST00000579993 334 ntBASIC3.49□□□□□ -1.85
HTTP42858 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.49□□□□□ -1.85
HTTP42858 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HTTP42858 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HTTP42858 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.49□□□□□ -1.85
HTTP42858 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HTTP42858 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HTTP42858 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
HTTP42858 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HTTP42858 RNA5SP52-201ENST00000362448 134 ntBASIC3.49□□□□□ -1.85
HTTP42858 RNU6-283P-201ENST00000364788 107 ntBASIC3.49□□□□□ -1.85
HTTP42858 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.49□□□□□ -1.85
HTTP42858 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.49□□□□□ -1.85
HTTP42858 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.49□□□□□ -1.85
HTTP42858 AC022149.2-201ENST00000621061 203 ntBASIC3.49□□□□□ -1.85
HTTP42858 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.49□□□□□ -1.85
HTTP42858 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HTTP42858 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HTTP42858 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HTTP42858 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
HTTP42858 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HTTP42858 ASNSP1-201ENST00000518311 1939 ntBASIC3.49□□□□□ -1.85
HTTP42858 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC3.49□□□□□ -1.85
HTTP42858 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.48□□□□□ -1.85
HTTP42858 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HTTP42858 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.48□□□□□ -1.85
HTTP42858 AC012065.2-201ENST00000421295 375 ntBASIC3.48□□□□□ -1.85
HTTP42858 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.48□□□□□ -1.85
HTTP42858 AC112653.1-201ENST00000443851 386 ntBASIC3.48□□□□□ -1.85
HTTP42858 RPL37P4-201ENST00000448908 268 ntBASIC3.48□□□□□ -1.85
HTTP42858 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.48□□□□□ -1.85
HTTP42858 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HTTP42858 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC3.48□□□□□ -1.85
HTTP42858 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HTTP42858 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HTTP42858 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.48□□□□□ -1.85
HTTP42858 AL513477.1-202ENST00000417061 214 ntBASIC3.48□□□□□ -1.85
HTTP42858 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.48□□□□□ -1.85
HTTP42858 AC021205.2-201ENST00000480069 347 ntBASIC3.48□□□□□ -1.85
HTTP42858 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC3.48□□□□□ -1.85
HTTP42858 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.48□□□□□ -1.85
HTTP42858 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
HTTP42858 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HTTP42858 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
HTTP42858 MIR22-201ENST00000362190 85 ntBASIC3.48□□□□□ -1.85
HTTP42858 ETF1P3-201ENST00000430422 1160 ntBASIC3.48□□□□□ -1.85
HTTP42858 FTH1P6-201ENST00000430768 320 ntBASIC3.48□□□□□ -1.85
HTTP42858 snoU13.23-201ENST00000458863 104 ntBASIC3.48□□□□□ -1.85
HTTP42858 USP9YP2-201ENST00000504503 1000 ntBASIC3.48□□□□□ -1.85
HTTP42858 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.48□□□□□ -1.85
HTTP42858 USP9YP1-201ENST00000513521 1002 ntBASIC3.48□□□□□ -1.85
HTTP42858 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.48□□□□□ -1.85
HTTP42858 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HTTP42858 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
HTTP42858 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HTTP42858 RNU1-108P-201ENST00000362556 161 ntBASIC3.47□□□□□ -1.85
HTTP42858 BX276092.3-201ENST00000424182 230 ntBASIC3.47□□□□□ -1.85
HTTP42858 TOMM20P4-201ENST00000427861 435 ntBASIC3.47□□□□□ -1.85
HTTP42858 UBL5P3-201ENST00000475112 231 ntBASIC3.47□□□□□ -1.85
HTTP42858 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.47□□□□□ -1.85
HTTP42858 RPS29P21-201ENST00000496272 170 ntBASIC3.47□□□□□ -1.85
HTTP42858 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.47□□□□□ -1.85
HTTP42858 AL035413.2-201ENST00000604801 525 ntBASIC3.47□□□□□ -1.85
HTTP42858 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.47□□□□□ -1.85
HTTP42858 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HTTP42858 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HTTP42858 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.47□□□□□ -1.85
HTTP42858 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HTTP42858 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HTTP42858 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HTTP42858 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.47□□□□□ -1.85
HTTP42858 MAPK10-362ENST00000641864 4484 ntBASIC3.47□□□□□ -1.85
HTTP42858 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
HTTP42858 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
HTTP42858 MIR34A-201ENST00000385130 110 ntBASIC3.46□□□□□ -1.85
HTTP42858 MIR9-1-201ENST00000385198 89 ntBASIC3.46□□□□□ -1.85
HTTP42858 ARL5AP4-201ENST00000430731 512 ntBASIC3.46□□□□□ -1.85
HTTP42858 VN1R48P-201ENST00000448149 1036 ntBASIC3.46□□□□□ -1.85
HTTP42858 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.85
HTTP42858 AC017037.2-201ENST00000513850 890 ntBASIC3.46□□□□□ -1.85
HTTP42858 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.85
HTTP42858 MIR4425-201ENST00000580572 84 ntBASIC3.46□□□□□ -1.85
HTTP42858 AC024153.1-201ENST00000603103 365 ntBASIC3.46□□□□□ -1.85
HTTP42858 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.46□□□□□ -1.85
HTTP42858 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
HTTP42858 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.46□□□□□ -1.85
HTTP42858 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms