Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.32□□□□□ -1.88
CEACAM3P40198 DNAJC19P6-201ENST00000401853 280 ntBASIC3.32□□□□□ -1.88
CEACAM3P40198 MTHFD2P2-201ENST00000407725 247 ntBASIC3.32□□□□□ -1.88
CEACAM3P40198 AP000357.1-201ENST00000409926 1165 ntBASIC3.32□□□□□ -1.88
CEACAM3P40198 AC069218.2-201ENST00000411665 344 ntBASIC3.32□□□□□ -1.88
CEACAM3P40198 HSPE1P12-201ENST00000412576 301 ntBASIC3.32□□□□□ -1.88
CEACAM3P40198 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.32□□□□□ -1.88
CEACAM3P40198 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.32□□□□□ -1.88
CEACAM3P40198 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CEACAM3P40198 AC092647.1-201ENST00000420654 287 ntBASIC3.32□□□□□ -1.88
CEACAM3P40198 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.32□□□□□ -1.88
CEACAM3P40198 ARF4P2-201ENST00000430209 526 ntBASIC3.32□□□□□ -1.88
CEACAM3P40198 RPS26P40-201ENST00000435209 294 ntBASIC3.32□□□□□ -1.88
CEACAM3P40198 AC006994.1-201ENST00000438212 839 ntBASIC3.32□□□□□ -1.88
CEACAM3P40198 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.32□□□□□ -1.88
CEACAM3P40198 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.32□□□□□ -1.88
CEACAM3P40198 NPM1P49-201ENST00000448027 714 ntBASIC3.32□□□□□ -1.88
CEACAM3P40198 RPL23AP23-201ENST00000452590 471 ntBASIC3.32□□□□□ -1.88
CEACAM3P40198 RPS7P7-201ENST00000463499 571 ntBASIC3.32□□□□□ -1.88
CEACAM3P40198 RPL7P19-201ENST00000469948 618 ntBASIC3.32□□□□□ -1.88
CEACAM3P40198 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.32□□□□□ -1.88
CEACAM3P40198 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.32□□□□□ -1.88
CEACAM3P40198 AC092593.2-201ENST00000513866 913 ntBASIC3.32□□□□□ -1.88
CEACAM3P40198 RNU7-143P-201ENST00000516781 65 ntBASIC3.32□□□□□ -1.88
CEACAM3P40198 RNU6-1231P-201ENST00000517185 103 ntBASIC3.32□□□□□ -1.88
CEACAM3P40198 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CEACAM3P40198 CIR1P1-201ENST00000524055 1133 ntBASIC3.32□□□□□ -1.88
CEACAM3P40198 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.32□□□□□ -1.88
CEACAM3P40198 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.32□□□□□ -1.88
CEACAM3P40198 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.32□□□□□ -1.88
CEACAM3P40198 AC233266.2-201ENST00000567067 528 ntBASIC3.32□□□□□ -1.88
CEACAM3P40198 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.32□□□□□ -1.88
CEACAM3P40198 AP000919.1-202ENST00000581139 1264 ntBASIC3.32□□□□□ -1.88
CEACAM3P40198 AC069366.1-201ENST00000583159 838 ntBASIC3.32□□□□□ -1.88
CEACAM3P40198 MIR5684-201ENST00000585074 65 ntBASIC3.32□□□□□ -1.88
CEACAM3P40198 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CEACAM3P40198 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.32□□□□□ -1.88
CEACAM3P40198 AC018618.2-201ENST00000604770 446 ntBASIC3.32□□□□□ -1.88
CEACAM3P40198 AC079610.2-201ENST00000604818 690 ntBASIC3.32□□□□□ -1.88
CEACAM3P40198 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.32□□□□□ -1.88
CEACAM3P40198 AC112484.5-201ENST00000624189 228 ntBASIC3.32□□□□□ -1.88
CEACAM3P40198 ATE1-AS1-202ENST00000636460 506 ntBASIC3.32□□□□□ -1.88
CEACAM3P40198 MIR492-201ENST00000638676 116 ntBASIC3.32□□□□□ -1.88
CEACAM3P40198 OR52H1-202ENST00000641796 1061 ntBASIC3.32□□□□□ -1.88
CEACAM3P40198 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CEACAM3P40198 MTND4P21-201ENST00000453886 1357 ntBASIC3.32□□□□□ -1.88
CEACAM3P40198 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.32□□□□□ -1.88
CEACAM3P40198 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CEACAM3P40198 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CEACAM3P40198 MTCO1P24-201ENST00000515438 1558 ntBASIC3.32□□□□□ -1.88
CEACAM3P40198 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CEACAM3P40198 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.32□□□□□ -1.88
CEACAM3P40198 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CEACAM3P40198 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CEACAM3P40198 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CEACAM3P40198 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CEACAM3P40198 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CEACAM3P40198 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CEACAM3P40198 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CEACAM3P40198 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.31□□□□□ -1.88
CEACAM3P40198 AC011978.2-201ENST00000569835 2054 ntBASIC3.31□□□□□ -1.88
CEACAM3P40198 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
CEACAM3P40198 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CEACAM3P40198 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CEACAM3P40198 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
CEACAM3P40198 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
CEACAM3P40198 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CEACAM3P40198 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CEACAM3P40198 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CEACAM3P40198 RNA5SP295-201ENST00000362655 121 ntBASIC3.31□□□□□ -1.88
CEACAM3P40198 MIR142-201ENST00000384835 87 ntBASIC3.31□□□□□ -1.88
CEACAM3P40198 RNU11-4P-201ENST00000391149 133 ntBASIC3.31□□□□□ -1.88
CEACAM3P40198 VTA1P1-201ENST00000414044 866 ntBASIC3.31□□□□□ -1.88
CEACAM3P40198 AC234782.4-201ENST00000417646 1048 ntBASIC3.31□□□□□ -1.88
CEACAM3P40198 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.31□□□□□ -1.88
CEACAM3P40198 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.31□□□□□ -1.88
CEACAM3P40198 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.31□□□□□ -1.88
CEACAM3P40198 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.31□□□□□ -1.88
CEACAM3P40198 AL513321.1-201ENST00000441175 761 ntBASIC3.31□□□□□ -1.88
CEACAM3P40198 RPS4XP4-201ENST00000443195 763 ntBASIC3.31□□□□□ -1.88
CEACAM3P40198 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.31□□□□□ -1.88
CEACAM3P40198 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.31□□□□□ -1.88
CEACAM3P40198 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.31□□□□□ -1.88
CEACAM3P40198 AC110792.1-201ENST00000491826 472 ntBASIC3.31□□□□□ -1.88
CEACAM3P40198 IGBP1P5-201ENST00000507524 1000 ntBASIC3.31□□□□□ -1.88
CEACAM3P40198 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CEACAM3P40198 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.31□□□□□ -1.88
CEACAM3P40198 OR5AK3P-201ENST00000527486 1297 ntBASIC3.31□□□□□ -1.88
CEACAM3P40198 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.31□□□□□ -1.88
CEACAM3P40198 CYCSP29-201ENST00000533731 318 ntBASIC3.31□□□□□ -1.88
CEACAM3P40198 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.31□□□□□ -1.88
CEACAM3P40198 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.31□□□□□ -1.88
CEACAM3P40198 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.31□□□□□ -1.88
CEACAM3P40198 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.31□□□□□ -1.88
CEACAM3P40198 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.31□□□□□ -1.88
CEACAM3P40198 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.31□□□□□ -1.88
CEACAM3P40198 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.31□□□□□ -1.88
CEACAM3P40198 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.31□□□□□ -1.88
CEACAM3P40198 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.31□□□□□ -1.88
CEACAM3P40198 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms