Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXA11P31270 U6.112-201ENST00000384129 70 ntBASIC4.67□□□□□ -1.66
HOXA11P31270 AL022722.2-201ENST00000402519 180 ntBASIC4.67□□□□□ -1.66
HOXA11P31270 AL078604.1-201ENST00000404609 466 ntBASIC4.67□□□□□ -1.66
HOXA11P31270 AL356131.1-201ENST00000405826 414 ntBASIC4.67□□□□□ -1.66
HOXA11P31270 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.67□□□□□ -1.66
HOXA11P31270 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXA11P31270 RPP40P1-201ENST00000426762 456 ntBASIC4.67□□□□□ -1.66
HOXA11P31270 AL008629.1-201ENST00000438615 184 ntBASIC4.67□□□□□ -1.66
HOXA11P31270 EXTL2P1-201ENST00000446218 416 ntBASIC4.67□□□□□ -1.66
HOXA11P31270 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXA11P31270 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.67□□□□□ -1.66
HOXA11P31270 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HOXA11P31270 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.67□□□□□ -1.66
HOXA11P31270 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
HOXA11P31270 RPS4XP6-201ENST00000477670 797 ntBASIC4.67□□□□□ -1.66
HOXA11P31270 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXA11P31270 HPRT1P2-201ENST00000505250 544 ntBASIC4.67□□□□□ -1.66
HOXA11P31270 AC008837.1-201ENST00000511513 412 ntBASIC4.67□□□□□ -1.66
HOXA11P31270 AC099522.1-202ENST00000514718 367 ntBASIC4.67□□□□□ -1.66
HOXA11P31270 AC087373.1-201ENST00000524920 491 ntBASIC4.67□□□□□ -1.66
HOXA11P31270 OR4A2P-201ENST00000527276 913 ntBASIC4.67□□□□□ -1.66
HOXA11P31270 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXA11P31270 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXA11P31270 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.67□□□□□ -1.66
HOXA11P31270 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXA11P31270 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.67□□□□□ -1.66
HOXA11P31270 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXA11P31270 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXA11P31270 AC018638.7-201ENST00000605836 1114 ntBASIC4.67□□□□□ -1.66
HOXA11P31270 AC096586.1-201ENST00000610267 561 ntBASIC4.67□□□□□ -1.66
HOXA11P31270 AL353726.1-201ENST00000614041 1000 ntBASIC4.67□□□□□ -1.66
HOXA11P31270 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXA11P31270 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXA11P31270 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.67□□□□□ -1.66
HOXA11P31270 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.67□□□□□ -1.66
HOXA11P31270 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.67□□□□□ -1.66
HOXA11P31270 MIR6715B-201ENST00000637172 77 ntBASIC4.67□□□□□ -1.66
HOXA11P31270 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HOXA11P31270 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXA11P31270 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXA11P31270 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
HOXA11P31270 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.67□□□□□ -1.66
HOXA11P31270 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
HOXA11P31270 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
HOXA11P31270 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HOXA11P31270 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.66□□□□□ -1.66
HOXA11P31270 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HOXA11P31270 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
HOXA11P31270 EOGT-210ENST00000615922 1931 ntBASIC4.66□□□□□ -1.66
HOXA11P31270 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXA11P31270 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXA11P31270 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HOXA11P31270 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HOXA11P31270 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
HOXA11P31270 Y_RNA.126-201ENST00000363382 111 ntBASIC4.66□□□□□ -1.66
HOXA11P31270 Y_RNA.169-201ENST00000363745 96 ntBASIC4.66□□□□□ -1.66
HOXA11P31270 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HOXA11P31270 Y_RNA.472-201ENST00000384322 102 ntBASIC4.66□□□□□ -1.66
HOXA11P31270 RNU1-44P-201ENST00000384453 163 ntBASIC4.66□□□□□ -1.66
HOXA11P31270 SNORD116-12-201ENST00000384468 92 ntBASIC4.66□□□□□ -1.66
HOXA11P31270 RN7SKP33-201ENST00000410942 340 ntBASIC4.66□□□□□ -1.66
HOXA11P31270 AC092638.1-201ENST00000411966 1275 ntBASIC4.66□□□□□ -1.66
HOXA11P31270 OR8G2P-201ENST00000412796 908 ntBASIC4.66□□□□□ -1.66
HOXA11P31270 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXA11P31270 MTND1P20-201ENST00000430341 950 ntBASIC4.66□□□□□ -1.66
HOXA11P31270 COX6B1P7-201ENST00000430845 235 ntBASIC4.66□□□□□ -1.66
HOXA11P31270 AL365396.1-201ENST00000430854 671 ntBASIC4.66□□□□□ -1.66
HOXA11P31270 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
HOXA11P31270 NANOGP2-201ENST00000435391 727 ntBASIC4.66□□□□□ -1.66
HOXA11P31270 UBE2D3P1-201ENST00000436669 444 ntBASIC4.66□□□□□ -1.66
HOXA11P31270 HMGB3P6-201ENST00000444896 598 ntBASIC4.66□□□□□ -1.66
HOXA11P31270 AL050341.1-201ENST00000447743 313 ntBASIC4.66□□□□□ -1.66
HOXA11P31270 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXA11P31270 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXA11P31270 ATG12P2-201ENST00000456830 416 ntBASIC4.66□□□□□ -1.66
HOXA11P31270 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.66□□□□□ -1.66
HOXA11P31270 AC111193.1-201ENST00000504097 155 ntBASIC4.66□□□□□ -1.66
HOXA11P31270 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXA11P31270 MRPS33P3-201ENST00000513456 322 ntBASIC4.66□□□□□ -1.66
HOXA11P31270 AC090151.1-201ENST00000520784 730 ntBASIC4.66□□□□□ -1.66
HOXA11P31270 AC010306.1-201ENST00000523223 1117 ntBASIC4.66□□□□□ -1.66
HOXA11P31270 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.66□□□□□ -1.66
HOXA11P31270 CYCSP28-201ENST00000534284 321 ntBASIC4.66□□□□□ -1.66
HOXA11P31270 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.66□□□□□ -1.66
HOXA11P31270 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXA11P31270 BNIP3P5-201ENST00000562290 498 ntBASIC4.66□□□□□ -1.66
HOXA11P31270 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXA11P31270 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXA11P31270 NBR2-204ENST00000587322 63 ntBASIC4.66□□□□□ -1.66
HOXA11P31270 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXA11P31270 AC121247.2-201ENST00000604776 136 ntBASIC4.66□□□□□ -1.66
HOXA11P31270 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.66□□□□□ -1.66
HOXA11P31270 AC011374.2-201ENST00000607135 526 ntBASIC4.66□□□□□ -1.66
HOXA11P31270 AC097505.1-201ENST00000610199 565 ntBASIC4.66□□□□□ -1.66
HOXA11P31270 OR1S1-201ENST00000624470 978 ntBASIC4.66□□□□□ -1.66
HOXA11P31270 AP003072.4-201ENST00000624580 310 ntBASIC4.66□□□□□ -1.66
HOXA11P31270 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HOXA11P31270 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXA11P31270 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms