Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PTPN6P29350 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.9□□□□□ -1.79
PTPN6P29350 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.9□□□□□ -1.79
PTPN6P29350 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PTPN6P29350 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PTPN6P29350 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.89□□□□□ -1.79
PTPN6P29350 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PTPN6P29350 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.89□□□□□ -1.79
PTPN6P29350 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.89□□□□□ -1.79
PTPN6P29350 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PTPN6P29350 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
PTPN6P29350 AP002784.2-201ENST00000397300 549 ntBASIC3.89□□□□□ -1.79
PTPN6P29350 AL161909.1-201ENST00000397390 712 ntBASIC3.89□□□□□ -1.79
PTPN6P29350 SNORA11C-201ENST00000408532 129 ntBASIC3.89□□□□□ -1.79
PTPN6P29350 BX664727.1-201ENST00000416024 466 ntBASIC3.89□□□□□ -1.79
PTPN6P29350 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.89□□□□□ -1.79
PTPN6P29350 AC004975.1-201ENST00000428733 208 ntBASIC3.89□□□□□ -1.79
PTPN6P29350 PSMA2P3-201ENST00000429685 675 ntBASIC3.89□□□□□ -1.79
PTPN6P29350 RPL7P4-203ENST00000430239 730 ntBASIC3.89□□□□□ -1.79
PTPN6P29350 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.89□□□□□ -1.79
PTPN6P29350 RPL36AP13-201ENST00000457490 317 ntBASIC3.89□□□□□ -1.79
PTPN6P29350 RPL32P14-201ENST00000463196 378 ntBASIC3.89□□□□□ -1.79
PTPN6P29350 AC078817.1-201ENST00000492623 435 ntBASIC3.89□□□□□ -1.79
PTPN6P29350 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.89□□□□□ -1.79
PTPN6P29350 AC093755.1-201ENST00000512950 1023 ntBASIC3.89□□□□□ -1.79
PTPN6P29350 RNU7-143P-201ENST00000516781 65 ntBASIC3.89□□□□□ -1.79
PTPN6P29350 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.89□□□□□ -1.79
PTPN6P29350 MRPL49P2-201ENST00000521066 465 ntBASIC3.89□□□□□ -1.79
PTPN6P29350 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.89□□□□□ -1.79
PTPN6P29350 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.89□□□□□ -1.79
PTPN6P29350 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.89□□□□□ -1.79
PTPN6P29350 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.89□□□□□ -1.79
PTPN6P29350 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.89□□□□□ -1.79
PTPN6P29350 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.89□□□□□ -1.79
PTPN6P29350 SERPINE4P-201ENST00000554978 281 ntBASIC3.89□□□□□ -1.79
PTPN6P29350 TVP23BP1-201ENST00000557500 617 ntBASIC3.89□□□□□ -1.79
PTPN6P29350 AL360157.1-201ENST00000565962 87 ntBASIC3.89□□□□□ -1.79
PTPN6P29350 MTND4LP25-201ENST00000570218 163 ntBASIC3.89□□□□□ -1.79
PTPN6P29350 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.89□□□□□ -1.79
PTPN6P29350 AC015911.5-201ENST00000587076 451 ntBASIC3.89□□□□□ -1.79
PTPN6P29350 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.89□□□□□ -1.79
PTPN6P29350 AL161729.3-201ENST00000603533 673 ntBASIC3.89□□□□□ -1.79
PTPN6P29350 AL158211.2-201ENST00000607282 395 ntBASIC3.89□□□□□ -1.79
PTPN6P29350 AC084824.5-201ENST00000612009 413 ntBASIC3.89□□□□□ -1.79
PTPN6P29350 MIR7151-201ENST00000617477 60 ntBASIC3.89□□□□□ -1.79
PTPN6P29350 AC068831.8-201ENST00000620171 435 ntBASIC3.89□□□□□ -1.79
PTPN6P29350 AC092608.3-201ENST00000625017 386 ntBASIC3.89□□□□□ -1.79
PTPN6P29350 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.89□□□□□ -1.79
PTPN6P29350 ASNSP1-204ENST00000641977 1664 ntBASIC3.89□□□□□ -1.79
PTPN6P29350 AC090337.1-201ENST00000579651 2074 ntBASIC3.89□□□□□ -1.79
PTPN6P29350 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PTPN6P29350 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PTPN6P29350 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.89□□□□□ -1.79
PTPN6P29350 LARP1BP1-201ENST00000506036 1359 ntBASIC3.89□□□□□ -1.79
PTPN6P29350 AC005261.4-201ENST00000600047 1385 ntBASIC3.89□□□□□ -1.79
PTPN6P29350 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PTPN6P29350 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PTPN6P29350 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PTPN6P29350 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PTPN6P29350 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PTPN6P29350 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PTPN6P29350 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.88□□□□□ -1.79
PTPN6P29350 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
PTPN6P29350 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.88□□□□□ -1.79
PTPN6P29350 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
PTPN6P29350 AL512646.1-201ENST00000269395 1077 ntBASIC3.88□□□□□ -1.79
PTPN6P29350 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PTPN6P29350 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.88□□□□□ -1.79
PTPN6P29350 EIF5P1-201ENST00000400019 1231 ntBASIC3.88□□□□□ -1.79
PTPN6P29350 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.88□□□□□ -1.79
PTPN6P29350 CYP4F29P-201ENST00000420685 446 ntBASIC3.88□□□□□ -1.79
PTPN6P29350 MTCO2P1-201ENST00000424648 477 ntBASIC3.88□□□□□ -1.79
PTPN6P29350 BTF3P10-201ENST00000433415 495 ntBASIC3.88□□□□□ -1.79
PTPN6P29350 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.88□□□□□ -1.79
PTPN6P29350 FABP5P3-201ENST00000437960 408 ntBASIC3.88□□□□□ -1.79
PTPN6P29350 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.88□□□□□ -1.79
PTPN6P29350 AC006011.1-201ENST00000442758 349 ntBASIC3.88□□□□□ -1.79
PTPN6P29350 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.88□□□□□ -1.79
PTPN6P29350 AC008379.1-201ENST00000463655 464 ntBASIC3.88□□□□□ -1.79
PTPN6P29350 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.88□□□□□ -1.79
PTPN6P29350 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.88□□□□□ -1.79
PTPN6P29350 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
PTPN6P29350 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.88□□□□□ -1.79
PTPN6P29350 AC109458.1-201ENST00000508858 316 ntBASIC3.88□□□□□ -1.79
PTPN6P29350 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PTPN6P29350 RN7SKP277-201ENST00000516895 283 ntBASIC3.88□□□□□ -1.79
PTPN6P29350 RNU6-334P-201ENST00000517072 102 ntBASIC3.88□□□□□ -1.79
PTPN6P29350 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.88□□□□□ -1.79
PTPN6P29350 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PTPN6P29350 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.88□□□□□ -1.79
PTPN6P29350 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.88□□□□□ -1.79
PTPN6P29350 AL020997.2-201ENST00000602607 184 ntBASIC3.88□□□□□ -1.79
PTPN6P29350 AC068790.5-201ENST00000602741 355 ntBASIC3.88□□□□□ -1.79
PTPN6P29350 AL049634.3-201ENST00000604968 457 ntBASIC3.88□□□□□ -1.79
PTPN6P29350 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.88□□□□□ -1.79
PTPN6P29350 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PTPN6P29350 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.88□□□□□ -1.79
PTPN6P29350 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.88□□□□□ -1.79
PTPN6P29350 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
PTPN6P29350 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 147.5 ms