Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.06□□□□□ -1.76
PTPN4P29074 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.06□□□□□ -1.76
PTPN4P29074 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.06□□□□□ -1.76
PTPN4P29074 AGGF1P6-201ENST00000569213 976 ntBASIC4.06□□□□□ -1.76
PTPN4P29074 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.06□□□□□ -1.76
PTPN4P29074 FAM27D1-201ENST00000612308 341 ntBASIC4.06□□□□□ -1.76
PTPN4P29074 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTPN4P29074 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.06□□□□□ -1.76
PTPN4P29074 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTPN4P29074 AP005264.7-201ENST00000625003 745 ntBASIC4.06□□□□□ -1.76
PTPN4P29074 IPO8P1-201ENST00000455509 3109 ntBASIC4.06□□□□□ -1.76
PTPN4P29074 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTPN4P29074 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.05□□□□□ -1.76
PTPN4P29074 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.05□□□□□ -1.76
PTPN4P29074 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PTPN4P29074 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
PTPN4P29074 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PTPN4P29074 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PTPN4P29074 RPS4XP5-202ENST00000449995 1334 ntBASIC4.05□□□□□ -1.76
PTPN4P29074 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.05□□□□□ -1.76
PTPN4P29074 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
PTPN4P29074 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PTPN4P29074 RNU1-14P-201ENST00000362759 152 ntBASIC4.05□□□□□ -1.76
PTPN4P29074 PPIAP31-201ENST00000405422 495 ntBASIC4.05□□□□□ -1.76
PTPN4P29074 MTATP6P31-201ENST00000406985 692 ntBASIC4.05□□□□□ -1.76
PTPN4P29074 Z98941.1-201ENST00000407764 100 ntBASIC4.05□□□□□ -1.76
PTPN4P29074 RNA5SP36-201ENST00000410197 133 ntBASIC4.05□□□□□ -1.76
PTPN4P29074 RN7SKP235-201ENST00000410662 305 ntBASIC4.05□□□□□ -1.76
PTPN4P29074 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.05□□□□□ -1.76
PTPN4P29074 CYP4F29P-201ENST00000420685 446 ntBASIC4.05□□□□□ -1.76
PTPN4P29074 AC115285.1-201ENST00000424879 736 ntBASIC4.05□□□□□ -1.76
PTPN4P29074 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.05□□□□□ -1.76
PTPN4P29074 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.05□□□□□ -1.76
PTPN4P29074 AL157831.1-201ENST00000426134 473 ntBASIC4.05□□□□□ -1.76
PTPN4P29074 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.05□□□□□ -1.76
PTPN4P29074 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.05□□□□□ -1.76
PTPN4P29074 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.05□□□□□ -1.76
PTPN4P29074 VN1R25P-201ENST00000443385 738 ntBASIC4.05□□□□□ -1.76
PTPN4P29074 AL359073.1-201ENST00000448036 403 ntBASIC4.05□□□□□ -1.76
PTPN4P29074 RPL7P55-201ENST00000450522 746 ntBASIC4.05□□□□□ -1.76
PTPN4P29074 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.05□□□□□ -1.76
PTPN4P29074 AL035407.2-201ENST00000454090 378 ntBASIC4.05□□□□□ -1.76
PTPN4P29074 VN1R40P-201ENST00000455196 941 ntBASIC4.05□□□□□ -1.76
PTPN4P29074 RPS20P21-201ENST00000466859 343 ntBASIC4.05□□□□□ -1.76
PTPN4P29074 SNX5P1-201ENST00000505757 1041 ntBASIC4.05□□□□□ -1.76
PTPN4P29074 FTH1P9-201ENST00000513251 355 ntBASIC4.05□□□□□ -1.76
PTPN4P29074 HMGB1P23-201ENST00000518743 568 ntBASIC4.05□□□□□ -1.76
PTPN4P29074 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.05□□□□□ -1.76
PTPN4P29074 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.05□□□□□ -1.76
PTPN4P29074 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.05□□□□□ -1.76
PTPN4P29074 AC106734.1-201ENST00000568646 663 ntBASIC4.05□□□□□ -1.76
PTPN4P29074 AC124283.4-201ENST00000581815 456 ntBASIC4.05□□□□□ -1.76
PTPN4P29074 AC006116.5-201ENST00000591936 559 ntBASIC4.05□□□□□ -1.76
PTPN4P29074 AC005255.1-201ENST00000593748 216 ntBASIC4.05□□□□□ -1.76
PTPN4P29074 AL161729.3-201ENST00000603533 673 ntBASIC4.05□□□□□ -1.76
PTPN4P29074 AC110741.2-201ENST00000605278 268 ntBASIC4.05□□□□□ -1.76
PTPN4P29074 RNA5SP108-201ENST00000605921 117 ntBASIC4.05□□□□□ -1.76
PTPN4P29074 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PTPN4P29074 AP000720.1-201ENST00000625091 483 ntBASIC4.05□□□□□ -1.76
PTPN4P29074 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
PTPN4P29074 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PTPN4P29074 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PTPN4P29074 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.05□□□□□ -1.76
PTPN4P29074 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
PTPN4P29074 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PTPN4P29074 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.04□□□□□ -1.76
PTPN4P29074 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTPN4P29074 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.04□□□□□ -1.76
PTPN4P29074 MIR16-2-201ENST00000362117 81 ntBASIC4.04□□□□□ -1.76
PTPN4P29074 RN7SKP280-201ENST00000364196 304 ntBASIC4.04□□□□□ -1.76
PTPN4P29074 MIR134-201ENST00000385258 73 ntBASIC4.04□□□□□ -1.76
PTPN4P29074 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
PTPN4P29074 MIR1303-201ENST00000408625 86 ntBASIC4.04□□□□□ -1.76
PTPN4P29074 AC092745.2-202ENST00000411880 369 ntBASIC4.04□□□□□ -1.76
PTPN4P29074 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.04□□□□□ -1.76
PTPN4P29074 AC008173.1-201ENST00000418901 264 ntBASIC4.04□□□□□ -1.76
PTPN4P29074 AC023128.2-201ENST00000420880 1223 ntBASIC4.04□□□□□ -1.76
PTPN4P29074 COX6B1P7-201ENST00000430845 235 ntBASIC4.04□□□□□ -1.76
PTPN4P29074 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.04□□□□□ -1.76
PTPN4P29074 AL049829.1-201ENST00000465411 156 ntBASIC4.04□□□□□ -1.76
PTPN4P29074 AC010307.1-201ENST00000467206 836 ntBASIC4.04□□□□□ -1.76
PTPN4P29074 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.04□□□□□ -1.76
PTPN4P29074 AL132838.2-201ENST00000492041 314 ntBASIC4.04□□□□□ -1.76
PTPN4P29074 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.04□□□□□ -1.76
PTPN4P29074 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.04□□□□□ -1.76
PTPN4P29074 AC112518.2-201ENST00000508565 425 ntBASIC4.04□□□□□ -1.76
PTPN4P29074 AC133963.2-201ENST00000513686 578 ntBASIC4.04□□□□□ -1.76
PTPN4P29074 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.04□□□□□ -1.76
PTPN4P29074 RNA5SP519-201ENST00000516480 119 ntBASIC4.04□□□□□ -1.76
PTPN4P29074 RN7SKP234-201ENST00000517173 224 ntBASIC4.04□□□□□ -1.76
PTPN4P29074 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.04□□□□□ -1.76
PTPN4P29074 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.04□□□□□ -1.76
PTPN4P29074 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.04□□□□□ -1.76
PTPN4P29074 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.04□□□□□ -1.76
PTPN4P29074 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.04□□□□□ -1.76
PTPN4P29074 EIF1P6-201ENST00000600054 334 ntBASIC4.04□□□□□ -1.76
PTPN4P29074 NTAN1P1-201ENST00000603150 646 ntBASIC4.04□□□□□ -1.76
PTPN4P29074 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
PTPN4P29074 FRG1HP-204ENST00000617940 757 ntBASIC4.04□□□□□ -1.76
PTPN4P29074 AL713922.2-201ENST00000619384 716 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms