Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 LARP7P2-201ENST00000575306 125 ntBASIC6.14□□□□□ -1.43
NFKB1P19838 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.14□□□□□ -1.43
NFKB1P19838 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.14□□□□□ -1.43
NFKB1P19838 CYP2C61P-201ENST00000604072 290 ntBASIC6.14□□□□□ -1.43
NFKB1P19838 CTHRC1P1-201ENST00000605383 469 ntBASIC6.14□□□□□ -1.43
NFKB1P19838 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC6.14□□□□□ -1.43
NFKB1P19838 CR381572.1-201ENST00000625098 102 ntBASIC6.14□□□□□ -1.43
NFKB1P19838 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.14□□□□□ -1.43
NFKB1P19838 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NFKB1P19838 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.14□□□□□ -1.43
NFKB1P19838 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NFKB1P19838 TCP11X1-202ENST00000622971 1372 ntBASIC6.14□□□□□ -1.43
NFKB1P19838 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NFKB1P19838 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NFKB1P19838 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
NFKB1P19838 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
NFKB1P19838 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC6.14□□□□□ -1.43
NFKB1P19838 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NFKB1P19838 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NFKB1P19838 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
NFKB1P19838 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.14□□□□□ -1.43
NFKB1P19838 AC022031.1-201ENST00000585985 2593 ntBASIC6.13□□□□□ -1.43
NFKB1P19838 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.13□□□□□ -1.43
NFKB1P19838 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.13□□□□□ -1.43
NFKB1P19838 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
NFKB1P19838 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
NFKB1P19838 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.13□□□□□ -1.43
NFKB1P19838 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
NFKB1P19838 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NFKB1P19838 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NFKB1P19838 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NFKB1P19838 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
NFKB1P19838 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NFKB1P19838 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
NFKB1P19838 AC067945.1-201ENST00000342609 618 ntBASIC6.13□□□□□ -1.43
NFKB1P19838 RNA5SP232-201ENST00000364144 119 ntBASIC6.13□□□□□ -1.43
NFKB1P19838 RNU4-20P-201ENST00000365601 151 ntBASIC6.13□□□□□ -1.43
NFKB1P19838 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.13□□□□□ -1.43
NFKB1P19838 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
NFKB1P19838 RNU4-26P-201ENST00000410270 107 ntBASIC6.13□□□□□ -1.43
NFKB1P19838 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC6.13□□□□□ -1.43
NFKB1P19838 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.13□□□□□ -1.43
NFKB1P19838 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC6.13□□□□□ -1.43
NFKB1P19838 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NFKB1P19838 RPL23AP15-201ENST00000450202 459 ntBASIC6.13□□□□□ -1.43
NFKB1P19838 AL645937.3-201ENST00000453647 936 ntBASIC6.13□□□□□ -1.43
NFKB1P19838 ACA64.4-201ENST00000459070 127 ntBASIC6.13□□□□□ -1.43
NFKB1P19838 AC011005.3-201ENST00000491624 395 ntBASIC6.13□□□□□ -1.43
NFKB1P19838 AC018797.1-201ENST00000510791 255 ntBASIC6.13□□□□□ -1.43
NFKB1P19838 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC6.13□□□□□ -1.43
NFKB1P19838 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC6.13□□□□□ -1.43
NFKB1P19838 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC6.13□□□□□ -1.43
NFKB1P19838 Y_RNA.665-201ENST00000516177 98 ntBASIC6.13□□□□□ -1.43
NFKB1P19838 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC6.13□□□□□ -1.43
NFKB1P19838 AP002373.2-201ENST00000541631 1060 ntBASIC6.13□□□□□ -1.43
NFKB1P19838 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC6.13□□□□□ -1.43
NFKB1P19838 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.13□□□□□ -1.43
NFKB1P19838 APOOP1-201ENST00000604695 592 ntBASIC6.13□□□□□ -1.43
NFKB1P19838 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC6.13□□□□□ -1.43
NFKB1P19838 AC130324.3-201ENST00000614165 542 ntBASIC6.13□□□□□ -1.43
NFKB1P19838 uc_338.15-201ENST00000615470 191 ntBASIC6.13□□□□□ -1.43
NFKB1P19838 uc_338.22-201ENST00000622722 187 ntBASIC6.13□□□□□ -1.43
NFKB1P19838 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NFKB1P19838 AC135068.12-201ENST00000637370 931 ntBASIC6.13□□□□□ -1.43
NFKB1P19838 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
NFKB1P19838 SAMMSON-210ENST00000641260 1308 ntBASIC6.13□□□□□ -1.43
NFKB1P19838 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NFKB1P19838 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.13□□□□□ -1.43
NFKB1P19838 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NFKB1P19838 RBMY1HP-201ENST00000382759 1389 ntBASIC6.13□□□□□ -1.43
NFKB1P19838 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NFKB1P19838 AC012618.3-205ENST00000637896 1496 ntBASIC6.13□□□□□ -1.43
NFKB1P19838 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NFKB1P19838 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
NFKB1P19838 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.13□□□□□ -1.43
NFKB1P19838 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.12□□□□□ -1.43
NFKB1P19838 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NFKB1P19838 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.12□□□□□ -1.43
NFKB1P19838 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
NFKB1P19838 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
NFKB1P19838 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
NFKB1P19838 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
NFKB1P19838 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
NFKB1P19838 Y_RNA.28-201ENST00000362554 111 ntBASIC6.12□□□□□ -1.43
NFKB1P19838 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
NFKB1P19838 SNORD37.1-201ENST00000390968 65 ntBASIC6.12□□□□□ -1.43
NFKB1P19838 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NFKB1P19838 GCNT1P4-201ENST00000404096 329 ntBASIC6.12□□□□□ -1.43
NFKB1P19838 RNU4-14P-201ENST00000410858 122 ntBASIC6.12□□□□□ -1.43
NFKB1P19838 PRELID3BP11-201ENST00000414230 479 ntBASIC6.12□□□□□ -1.43
NFKB1P19838 NMD3P2-201ENST00000421815 761 ntBASIC6.12□□□□□ -1.43
NFKB1P19838 AC005517.2-201ENST00000424673 553 ntBASIC6.12□□□□□ -1.43
NFKB1P19838 MTCYBP9-201ENST00000431021 303 ntBASIC6.12□□□□□ -1.43
NFKB1P19838 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC6.12□□□□□ -1.43
NFKB1P19838 AL450996.1-201ENST00000445574 1202 ntBASIC6.12□□□□□ -1.43
NFKB1P19838 AL445466.1-201ENST00000448432 357 ntBASIC6.12□□□□□ -1.43
NFKB1P19838 RBMY2TP-201ENST00000451162 947 ntBASIC6.12□□□□□ -1.43
NFKB1P19838 SDC4P-201ENST00000453285 601 ntBASIC6.12□□□□□ -1.43
NFKB1P19838 AP1S2P1-201ENST00000457344 379 ntBASIC6.12□□□□□ -1.43
NFKB1P19838 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms