Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
XRCC1P18887 IPO8P1-201ENST00000455509 3109 ntBASIC3.9□□□□□ -1.79
XRCC1P18887 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.9□□□□□ -1.79
XRCC1P18887 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.9□□□□□ -1.79
XRCC1P18887 AL512283.1-201ENST00000606756 1384 ntBASIC3.89□□□□□ -1.79
XRCC1P18887 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.89□□□□□ -1.79
XRCC1P18887 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.89□□□□□ -1.79
XRCC1P18887 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.89□□□□□ -1.79
XRCC1P18887 RNU6-792P-201ENST00000363490 107 ntBASIC3.89□□□□□ -1.79
XRCC1P18887 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
XRCC1P18887 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
XRCC1P18887 RPL32P23-201ENST00000397237 405 ntBASIC3.89□□□□□ -1.79
XRCC1P18887 AC025750.1-201ENST00000399891 379 ntBASIC3.89□□□□□ -1.79
XRCC1P18887 AL138878.1-201ENST00000405131 347 ntBASIC3.89□□□□□ -1.79
XRCC1P18887 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC3.89□□□□□ -1.79
XRCC1P18887 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.89□□□□□ -1.79
XRCC1P18887 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
XRCC1P18887 AC023128.2-201ENST00000420880 1223 ntBASIC3.89□□□□□ -1.79
XRCC1P18887 RPL7P2-201ENST00000427639 268 ntBASIC3.89□□□□□ -1.79
XRCC1P18887 HMGB3P5-201ENST00000428894 612 ntBASIC3.89□□□□□ -1.79
XRCC1P18887 AC005189.1-201ENST00000431286 310 ntBASIC3.89□□□□□ -1.79
XRCC1P18887 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.89□□□□□ -1.79
XRCC1P18887 TBCAP1-201ENST00000436520 327 ntBASIC3.89□□□□□ -1.79
XRCC1P18887 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.89□□□□□ -1.79
XRCC1P18887 RPS3AP6-201ENST00000484430 795 ntBASIC3.89□□□□□ -1.79
XRCC1P18887 AC026726.1-201ENST00000512859 601 ntBASIC3.89□□□□□ -1.79
XRCC1P18887 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.89□□□□□ -1.79
XRCC1P18887 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.89□□□□□ -1.79
XRCC1P18887 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.89□□□□□ -1.79
XRCC1P18887 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.89□□□□□ -1.79
XRCC1P18887 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.89□□□□□ -1.79
XRCC1P18887 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.89□□□□□ -1.79
XRCC1P18887 AP003049.1-201ENST00000529418 457 ntBASIC3.89□□□□□ -1.79
XRCC1P18887 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.89□□□□□ -1.79
XRCC1P18887 AC092851.1-201ENST00000535964 478 ntBASIC3.89□□□□□ -1.79
XRCC1P18887 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.89□□□□□ -1.79
XRCC1P18887 CBX3P5-201ENST00000552017 521 ntBASIC3.89□□□□□ -1.79
XRCC1P18887 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.89□□□□□ -1.79
XRCC1P18887 AC022968.1-201ENST00000567372 442 ntBASIC3.89□□□□□ -1.79
XRCC1P18887 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.89□□□□□ -1.79
XRCC1P18887 NF1P5-201ENST00000588287 448 ntBASIC3.89□□□□□ -1.79
XRCC1P18887 VN1R79P-201ENST00000593540 513 ntBASIC3.89□□□□□ -1.79
XRCC1P18887 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.89□□□□□ -1.79
XRCC1P18887 AC010680.3-201ENST00000604215 520 ntBASIC3.89□□□□□ -1.79
XRCC1P18887 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.89□□□□□ -1.79
XRCC1P18887 AC097460.3-201ENST00000623099 442 ntBASIC3.89□□□□□ -1.79
XRCC1P18887 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.89□□□□□ -1.79
XRCC1P18887 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.89□□□□□ -1.79
XRCC1P18887 AC106871.1-201ENST00000568324 3102 ntBASIC3.89□□□□□ -1.79
XRCC1P18887 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.89□□□□□ -1.79
XRCC1P18887 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
XRCC1P18887 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
XRCC1P18887 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
XRCC1P18887 MTCO1P18-201ENST00000455518 1419 ntBASIC3.88□□□□□ -1.79
XRCC1P18887 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.88□□□□□ -1.79
XRCC1P18887 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
XRCC1P18887 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
XRCC1P18887 MIR1251-201ENST00000408552 70 ntBASIC3.88□□□□□ -1.79
XRCC1P18887 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
XRCC1P18887 AC093698.1-201ENST00000423843 571 ntBASIC3.88□□□□□ -1.79
XRCC1P18887 ETF1P3-201ENST00000430422 1160 ntBASIC3.88□□□□□ -1.79
XRCC1P18887 ARL4AP4-201ENST00000434170 518 ntBASIC3.88□□□□□ -1.79
XRCC1P18887 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.88□□□□□ -1.79
XRCC1P18887 AL590762.3-201ENST00000436372 640 ntBASIC3.88□□□□□ -1.79
XRCC1P18887 AC122718.1-201ENST00000439448 744 ntBASIC3.88□□□□□ -1.79
XRCC1P18887 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.88□□□□□ -1.79
XRCC1P18887 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
XRCC1P18887 ARL5AP2-201ENST00000444698 533 ntBASIC3.88□□□□□ -1.79
XRCC1P18887 TPTE2P6-202ENST00000445572 1007 ntBASIC3.88□□□□□ -1.79
XRCC1P18887 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.88□□□□□ -1.79
XRCC1P18887 HMGB3P21-201ENST00000452483 547 ntBASIC3.88□□□□□ -1.79
XRCC1P18887 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.88□□□□□ -1.79
XRCC1P18887 FAM133DP-201ENST00000464802 691 ntBASIC3.88□□□□□ -1.79
XRCC1P18887 AC078857.1-201ENST00000469870 667 ntBASIC3.88□□□□□ -1.79
XRCC1P18887 AP000926.1-201ENST00000479573 241 ntBASIC3.88□□□□□ -1.79
XRCC1P18887 RPS4XP15-201ENST00000489210 795 ntBASIC3.88□□□□□ -1.79
XRCC1P18887 AC023050.1-201ENST00000498198 304 ntBASIC3.88□□□□□ -1.79
XRCC1P18887 AC133963.2-201ENST00000513686 578 ntBASIC3.88□□□□□ -1.79
XRCC1P18887 AC005798.1-201ENST00000513715 387 ntBASIC3.88□□□□□ -1.79
XRCC1P18887 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.88□□□□□ -1.79
XRCC1P18887 YPEL5P3-201ENST00000547227 352 ntBASIC3.88□□□□□ -1.79
XRCC1P18887 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.88□□□□□ -1.79
XRCC1P18887 AC027104.1-201ENST00000563702 681 ntBASIC3.88□□□□□ -1.79
XRCC1P18887 AC090912.3-201ENST00000609775 533 ntBASIC3.88□□□□□ -1.79
XRCC1P18887 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.88□□□□□ -1.79
XRCC1P18887 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.88□□□□□ -1.79
XRCC1P18887 LINC00561-201ENST00000565815 2738 ntBASIC3.88□□□□□ -1.79
XRCC1P18887 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
XRCC1P18887 UBE3AP2-201ENST00000429033 2259 ntBASIC3.88□□□□□ -1.79
XRCC1P18887 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
XRCC1P18887 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
XRCC1P18887 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
XRCC1P18887 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
XRCC1P18887 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
XRCC1P18887 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.88□□□□□ -1.79
XRCC1P18887 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
XRCC1P18887 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
XRCC1P18887 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.87□□□□□ -1.79
XRCC1P18887 HSPA8P1-201ENST00000425843 1833 ntBASIC3.87□□□□□ -1.79
XRCC1P18887 AC007685.1-201ENST00000329806 452 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms